RNA–Protein interactions for RNA: ENST00000344722.5

SMC4-201, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-201ENST00000344722 MED8Q96G25 268 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 MAGEB10Q96LZ2 347 aaPredicted RBP18.08■□□□□ 0.49
SMC4-201ENST00000344722 SLC38A2Q96QD8 506 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 AASDHPPTQ9NRN7 309 aa18.08■□□□□ 0.49
SMC4-201ENST00000344722 OR56A5P0C7T3 313 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 CD86P42081 329 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 LSAMPQ13449 338 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 C6orf183Q5T699 404 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 IL23RQ5VWK5 629 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 MACC1Q6ZN28 852 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 CENPSQ8N2Z9 138 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 TWIST2Q8WVJ9 160 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 TINF2Q9BSI4 451 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 ARL15Q9NXU5 204 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 TRPM5Q9NZQ8 1165 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 PDP1Q9P0J1 537 aaPredicted RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 RPS6KB2Q9UBS0 482 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 PSME2Q9UL46 239 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 NOS3P29474 1203 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 THOP1P52888 689 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 AIF1P55008 147 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 POU5F1Q01860 360 aaKnown RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 GNA12Q03113 381 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 CERCAMQ5T4B2 595 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 EEF1AKMT1Q8WVE0 214 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 C12orf43Q96C57 262 aaKnown RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 MYOZ2Q9NPC6 264 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 RASSF1Q9NS23 344 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 POLR3HQ9Y535 204 aaPredicted RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 PCP4L1A6NKN8 68 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 FTH1P02794 183 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 PPIBP23284 216 aaKnown RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 UGT2B15P54855 530 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.08■□□□□ 0.48
SMC4-201ENST00000344722 C10orf53Q8N6V4 93 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 VPS28Q9UK41 221 aa18.08■□□□□ 0.48
SMC4-201ENST00000344722 TNS2Q63HR2 1409 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 RFXANKO14593 260 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TOR1BO14657 336 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TCF4P15884 667 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 GNAZP19086 355 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 CAPZA2P47755 286 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 SLC9B1Q4ZJI4 515 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 RASSF6Q6ZTQ3 369 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ANKRD23Q86SG2 305 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TBX1O43435 398 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 USP17L7P0C7H9 530 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ALDH9A1P49189 494 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TTPAP49638 278 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 PIH1D2Q8WWB5 315 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 DIRAS2Q96HU8 199 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 COMMD9Q9P000 198 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TNFSF13BQ9Y275 285 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ANKRD26Q9UPS8 1709 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 C17orf102A2RUQ5 167 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 SCELO95171 688 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 KLRC2P26717 231 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 STARP49675 285 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 CCDC36Q8IYA8 594 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 CARNMT1Q8N4J0 409 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 AGBL3Q8NEM8 1001 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ZNF420Q8TAQ5 688 aaPredicted RBP18.07■□□□□ 0.48
SMC4-201ENST00000344722 TLR8Q9NR97 1041 aaKnown RBP18.07■□□□□ 0.48
SMC4-201ENST00000344722 ELOVL7A1L3X0 281 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 RPLP0P05388 317 aaKnown RBP18.07■□□□□ 0.48
SMC4-201ENST00000344722 MATKP42679 507 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 CLCN2P51788 898 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 CCDC157Q569K6 752 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TLDC1Q6P9B6 456 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 PRR23BQ6ZRT6 265 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 AHSA2Q719I0 299 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ADAMTSL2Q86TH1 951 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 ARMC8Q8IUR7 673 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 NAT8LQ8N9F0 302 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TRPV1Q8NER1 839 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 FBXO44Q9H4M3 255 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 STON1Q9Y6Q2 735 aa18.07■□□□□ 0.48
SMC4-201ENST00000344722 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 A6NHS1 94 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 OR6B1O95007 311 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 NFICP08651 508 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 MYL9P24844 172 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 PSMA1P25786 263 aaKnown RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 CHRNA5P30532 468 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 OAZ1P54368 228 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 DDI2Q5TDH0 399 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 STYK1Q6J9G0 422 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 TUBA3EQ6PEY2 450 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 PTCD2Q8WV60 388 aaKnown RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 MRPS7Q9Y2R9 242 aaKnown RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 ITM2AO43736 263 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 NTRK1P04629 796 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 XRCC1P18887 633 aaPredicted RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 BCAP31P51572 246 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 ALFQ53S48 1182 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 MFSD14CQ5VZR4 134 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 FSTL4Q6MZW2 842 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 TMPRSS11AQ6ZMR5 421 aa18.06■□□□□ 0.48
SMC4-201ENST00000344722 RALGPS2Q86X27 583 aaPredicted RBP18.06■□□□□ 0.48
SMC4-201ENST00000344722 HDAC10Q969S8 669 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms