RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 GOLGA6CA6NDK9 693 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GOLGA6BA6NDN3 693 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GCATO75600 419 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 ZRANB2O95218 330 aaKnown RBP eCLIP16.08■□□□□ 0.16
ATG4B-201ENST00000344376 TRBC1P01850 177 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GOLGA6DP0CG33 693 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GM2AP17900 193 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 TRIM23P36406 574 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 ETV3P41162 512 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 CDKN2BP42772 138 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 NAP1L1P55209 391 aaKnown RBP16.08■□□□□ 0.16
ATG4B-201ENST00000344376 NR0B2Q15466 257 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 NPNTQ6UXI9 565 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 SPOCD1Q6ZMY3 1216 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 HSD11B1LQ7Z5J1 315 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 TSPAN33Q86UF1 283 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GKN2Q86XP6 184 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 CCDC50Q8IVM0 306 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 KATNAL2Q8IYT4 538 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 RBM41Q96IZ5 413 aaKnown RBP16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GOLPH3Q9H4A6 298 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 PCDH9Q9HC56 1237 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 GOLGA6AQ9NYA3 693 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 PNMA8BQ9ULN7 279 aaPredicted RBP16.08■□□□□ 0.16
ATG4B-201ENST00000344376 DGKBQ9Y6T7 804 aa16.08■□□□□ 0.16
ATG4B-201ENST00000344376 FRYQ5TBA9 3013 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 CAPN8A6NHC0 703 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 TNFRSF10CO14798 259 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 MYCLP1P12525 358 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-201ENST00000344376 TGM2P21980 687 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 CD86P42081 329 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 NIPAL4Q0D2K0 466 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 ZBTB17Q13105 803 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 TFDP3Q5H9I0 405 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 C6orf132Q5T0Z8 1188 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 KAZNQ674X7 775 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 LRRC66Q68CR7 880 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 RAET1GQ6H3X3 334 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 LVRNQ6Q4G3 990 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 MARCH9Q86YJ5 346 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 RCOR2Q8IZ40 523 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 TXLNBQ8N3L3 684 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 LPCAT1Q8NF37 534 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 IFI44Q8TCB0 444 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 PDXPQ96GD0 296 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 BOCQ9BWV1 1114 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 ADGRE3Q9BY15 652 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 ABCG4Q9H172 646 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 TFR2Q9UP52 801 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 CLCA2Q9UQC9 943 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 AKAP13Q12802 2813 aa16.07■□□□□ 0.16
ATG4B-201ENST00000344376 LY6G6EA0A0G2JKS1 128 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 YY2O15391 372 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CST8O60676 142 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 INSM1Q01101 510 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-201ENST00000344376 TARDBPQ13148 414 aaKnown RBP eCLIP16.06■□□□□ 0.162e-12■■■■□ 21.7
ATG4B-201ENST00000344376 TAZQ16635 292 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CDKN3Q16667 212 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CRTC1Q6UUV9 634 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 Q6ZVL8 140 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CACTIN-AS1Q8N1I8 211 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CBARPQ8N350 705 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-201ENST00000344376 EXD1Q8NHP7 514 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 NAT6Q93015 286 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 NXPE2Q96DL1 559 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 BAG1Q99933 345 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CLPBQ9H078 707 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 FGF22Q9HCT0 170 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 IMPACTQ9P2X3 320 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 MOSPD1Q9UJG1 213 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 U3KQA8 63 aa16.06■□□□□ 0.16
ATG4B-201ENST00000344376 CPED1A4D0V7 1026 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 TRABD2BA6NFA1 517 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 TMEM202A6NGA9 273 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 OPA1O60313 960 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 PYGLP06737 847 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 MYF5P13349 255 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 TEAD1P28347 426 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 CLDN6P56747 220 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 DPTQ07507 201 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 CAMK2BQ13554 666 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 EFL1Q7Z2Z2 1120 aaKnown RBP16.05■□□□□ 0.16
ATG4B-201ENST00000344376 KIAA1328Q86T90 577 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 NT5DC3Q86UY8 548 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 HEATR4Q86WZ0 1026 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 CNTD1Q8N815 330 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 MAPK15Q8TD08 544 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 TFB1MQ8WVM0 346 aaKnown RBP16.05■□□□□ 0.16
ATG4B-201ENST00000344376 OR1E3Q8WZA6 343 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 P3H4Q92791 437 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 AP2M1Q96CW1 435 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 AGAP3Q96P47 875 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 RBM15Q96T37 977 aaKnown RBP eCLIP16.05■□□□□ 0.161e-11■■□□□ 13.7
ATG4B-201ENST00000344376 TEX101Q9BY14 249 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 CEP41Q9BYV8 373 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 IGF2RP11717 2491 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 LRRK1Q38SD2 2015 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 PTPRBP23467 1997 aa16.05■□□□□ 0.16
ATG4B-201ENST00000344376 ARID1BQ8NFD5 2236 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms