RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 ING5Q8WYH8 240 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 IRF7Q92985 503 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 SKA1Q96BD8 255 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 HTATIP2Q9BUP3 242 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 GPAMQ9HCL2 828 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 BPIFA1Q9NP55 256 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 HACD3Q9P035 362 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 FKBPLQ9UIM3 349 aa20.01■□□□□ 0.79
RTN1-202ENST00000342503 A0A0U1RQS6 177 aa20■□□□□ 0.79
RTN1-202ENST00000342503 TMEM114B3SHH9 223 aa20■□□□□ 0.79
RTN1-202ENST00000342503 H2AFYO75367 372 aaKnown RBP20■□□□□ 0.79
RTN1-202ENST00000342503 WISP3O95389 354 aaPredicted RBP20■□□□□ 0.79
RTN1-202ENST00000342503 IGSF6O95976 241 aa20■□□□□ 0.79
RTN1-202ENST00000342503 SRCP12931 536 aa20■□□□□ 0.79
RTN1-202ENST00000342503 SERPINB3P29508 390 aa20■□□□□ 0.79
RTN1-202ENST00000342503 PMLP29590 882 aa20■□□□□ 0.79
RTN1-202ENST00000342503 GKP32189 559 aa20■□□□□ 0.79
RTN1-202ENST00000342503 GRIA4P48058 902 aa20■□□□□ 0.79
RTN1-202ENST00000342503 STK19P49842 368 aaPredicted RBP20■□□□□ 0.79
RTN1-202ENST00000342503 BCL2L1Q07817 233 aa20■□□□□ 0.79
RTN1-202ENST00000342503 ILF2Q12905 390 aaKnown RBP20■□□□□ 0.79
RTN1-202ENST00000342503 LIPMQ5VYY2 423 aa20■□□□□ 0.79
RTN1-202ENST00000342503 PIWIL2Q8TC59 973 aaKnown RBP20■□□□□ 0.79
RTN1-202ENST00000342503 GATA5Q9BWX5 397 aaPredicted RBP20■□□□□ 0.79
RTN1-202ENST00000342503 BBS2Q9BXC9 721 aa20■□□□□ 0.79
RTN1-202ENST00000342503 PNPOQ9NVS9 261 aa20■□□□□ 0.79
RTN1-202ENST00000342503 CORO1CQ9ULV4 474 aaPredicted RBP20■□□□□ 0.79
RTN1-202ENST00000342503 ZNF711Q9Y462 761 aa20■□□□□ 0.79
RTN1-202ENST00000342503 H0YHG0 523 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 STX7O15400 261 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 LTA4HP09960 611 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 CCDC166P0CW27 439 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 FDXRP22570 491 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 KPNA2P52292 529 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 ERVK-21P61565 698 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 TMEM207Q6UWW9 146 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 SCG3Q8WXD2 468 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 SAMD11Q96NU1 681 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 MRPL57Q9BQC6 102 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 MRPL46Q9H2W6 279 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 SPHK2Q9NRA0 654 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 INTS10Q9NVR2 710 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 TBC1D14Q9P2M4 693 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 NUP210Q8TEM1 1887 aaPredicted RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 TRAFD1O14545 582 aaPredicted RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 ZNF197O14709 1029 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 DLX3O60479 287 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 ALPIP09923 528 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 BMP1P13497 986 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 MC4RP32245 332 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 MAPK8P45983 427 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 PRKAA2P54646 552 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 ZBTB16Q05516 673 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 FAM83EQ2M2I3 478 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 AGAP9Q5VTM2 703 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 CLNKQ7Z7G1 428 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 PIM3Q86V86 326 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 WDR75Q8IWA0 830 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 RYBPQ8N488 228 aaPredicted RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 ANKRD49Q8WVL7 239 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 UBXN10Q96LJ8 280 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 FAM96AQ9H5X1 160 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 CERS4Q9HA82 394 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 MAGEE1Q9HCI5 957 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 DPP7Q9UHL4 492 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 MRPS23Q9Y3D9 190 aaKnown RBP19.99■□□□□ 0.79
RTN1-202ENST00000342503 WNT6Q9Y6F9 365 aa19.99■□□□□ 0.79
RTN1-202ENST00000342503 CXorf51AA0A1B0GTR3 108 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 HTRA2O43464 458 aaPredicted RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 HSPA4LO95757 839 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 POU2F2P09086 479 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 TYRP14679 529 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 TCF3P15923 654 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 SKIV2L2P42285 1042 aaKnown RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 CDKN1CP49918 316 aaPredicted RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 TIAL1Q01085 375 aaKnown RBP eCLIP19.98■□□□□ 0.79
RTN1-202ENST00000342503 CBX2Q14781 532 aaPredicted RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 TECRLQ5HYJ1 363 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 SPDYAQ5MJ70 313 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 LYSMD3Q7Z3D4 306 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 ALYREFQ86V81 257 aaKnown RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 OR2AP1Q8NGE2 309 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 ITFG1Q8TB96 612 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 MOCOSQ96EN8 888 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 SIKE1Q9BRV8 207 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 AARSD1Q9BTE6 412 aaKnown RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 WWP1Q9H0M0 922 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 PIDD1Q9HB75 910 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 TXLNGQ9NUQ3 528 aa19.98■□□□□ 0.79
RTN1-202ENST00000342503 MTF2Q9Y483 593 aaPredicted RBP19.98■□□□□ 0.79
RTN1-202ENST00000342503 SOCS5O75159 536 aa19.97■□□□□ 0.79
RTN1-202ENST00000342503 UNC5CO95185 931 aa19.97■□□□□ 0.79
RTN1-202ENST00000342503 PABPC1P11940 636 aaKnown RBP19.97■□□□□ 0.79
RTN1-202ENST00000342503 HOXB8P17481 243 aaPredicted RBP19.97■□□□□ 0.79
RTN1-202ENST00000342503 RPL26P61254 145 aaKnown RBP19.97■□□□□ 0.79
RTN1-202ENST00000342503 PEX6Q13608 980 aa19.97■□□□□ 0.79
RTN1-202ENST00000342503 SHHQ15465 462 aa19.97■□□□□ 0.79
RTN1-202ENST00000342503 LY6G5CQ5SRR4 150 aa19.97■□□□□ 0.79
RTN1-202ENST00000342503 C12orf76Q8N812 135 aaPredicted RBP19.97■□□□□ 0.79
RTN1-202ENST00000342503 LPGAT1Q92604 370 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms