RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 IL17RDQ8NFM7 739 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 NDNFQ8TB73 568 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 JPH3Q8WXH2 748 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 TLR9Q9NR96 1032 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 TCEAL9Q9UHQ7 104 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 PCDHGA8Q9Y5G5 932 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 A3GALT2U3KPV4 340 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 KATNA1O75449 491 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 HTR1AP08908 422 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 CSRP3P50461 194 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 PNCKQ6P2M8 343 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 PTRH1Q86Y79 214 aaKnown RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 SMG8Q8ND04 991 aaKnown RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 RORBQ92753 470 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 KCTD14Q9BQ13 255 aaPredicted RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 C1QTNF1Q9BXJ1 281 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 SLIRPQ9GZT3 109 aaKnown RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 MKRN2Q9H000 416 aaKnown RBP18.55■□□□□ 0.56
SMPD1-201ENST00000342245 FBXO5Q9UKT4 447 aa18.55■□□□□ 0.56
SMPD1-201ENST00000342245 TMCC2O75069 709 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 PIGRP01833 764 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 SLURP2P0DP57 97 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 NAGAP17050 411 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF135P52742 658 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CRY1Q16526 586 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 GEN1Q17RS7 908 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 BRMS1LQ5PSV4 323 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CCBE1Q6UXH8 406 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-201ENST00000342245 KIAA1958Q8N8K9 716 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CHDHQ8NE62 594 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CERKQ8TCT0 537 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 DPF3Q92784 378 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 FBXO28Q9NVF7 368 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 HOXC10Q9NYD6 342 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 GTSE1Q9NYZ3 720 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.54■□□□□ 0.56
SMPD1-201ENST00000342245 GRIP1Q9Y3R0 1128 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 TMEM150BA6NC51 233 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 TARM1B6A8C7 271 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 AP3B1O00203 1094 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 MDM4O15151 490 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 SOAT2O75908 522 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 INMTO95050 263 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 SBK3P0C264 359 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 POLD2P49005 469 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 GALNT3Q14435 633 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 DPY19L1Q2PZI1 675 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 COQ5Q5HYK3 327 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 SNAP47Q5SQN1 464 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 TAS1R3Q7RTX0 852 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 OR5B17Q8NGF7 314 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 YIPF6Q96EC8 236 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 FEM1AQ9BSK4 669 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 DEFB129Q9H1M3 183 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 DTLQ9NZJ0 730 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 CYTH4Q9UIA0 394 aa18.54■□□□□ 0.56
SMPD1-201ENST00000342245 QSER1Q2KHR3 1735 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 TCRBV5S2A0A599 114 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 SHOXO15266 292 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 INPP4BO15327 924 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 DLX3O60479 287 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 CCDC159P0C7I6 412 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 KPNA2P52292 529 aaKnown RBP18.53■□□□□ 0.56
SMPD1-201ENST00000342245 UGCGQ16739 394 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 FAM102AQ5T9C2 384 aaPredicted RBP18.53■□□□□ 0.56
SMPD1-201ENST00000342245 WDR49Q8IV35 697 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 FAM109AQ8N4B1 249 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 CCNYL1Q8N7R7 359 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 RDM1Q8NG50 284 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 MCFD2Q8NI22 146 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 ZNF300Q96RE9 604 aaPredicted RBP18.53■□□□□ 0.56
SMPD1-201ENST00000342245 BTBD2Q9BX70 525 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 SLC7A5P2Q9GIP4 190 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 CAB39LQ9H9S4 337 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 ATP13A2Q9NQ11 1180 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 EGFL7Q9UHF1 273 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 SLCO3A1Q9UIG8 710 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 OSGIN1Q9UJX0 560 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 STAP1Q9ULZ2 295 aa18.53■□□□□ 0.56
SMPD1-201ENST00000342245 RUVBL2Q9Y230 463 aaKnown RBP18.53■□□□□ 0.56
SMPD1-201ENST00000342245 TEX51A0A1B0GUA7 166 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 C2CD4BA6NLJ0 364 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TRAPPC2P0DI81 140 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TRAPPC2BP0DI82 140 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 CD19P15391 556 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 HDCP19113 662 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 RACK1P63244 317 aaKnown RBP18.52■□□□□ 0.56
SMPD1-201ENST00000342245 SYCE2Q6PIF2 218 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 PLD3Q8IV08 490 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 COLGALT1Q8NBJ5 622 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 HTR3CQ8WXA8 447 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 PEX13Q92968 403 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 ATXN7L3BQ96GX2 97 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TJP2Q9UDY2 1190 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 UBXN8O00124 270 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 TBX1O43435 398 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 SNX4O95219 450 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 ALPLP05186 524 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 PDGFRAP16234 1089 aa18.52■□□□□ 0.56
SMPD1-201ENST00000342245 PRIM2P49643 509 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms