RNA–Protein interactions for RNA: ENST00000341472.9

SYNE2-201, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 1,132 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-201ENST00000341472 ZNF830Q96NB3 372 aaPredicted RBP20.17■□□□□ 0.82
SYNE2-201ENST00000341472 RBM15Q96T37 977 aaKnown RBP eCLIP20.17■□□□□ 0.82
SYNE2-201ENST00000341472 LGR4Q9BXB1 951 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 TRIM5Q9C035 493 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 FGF22Q9HCT0 170 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PHPT1Q9NRX4 125 aaPredicted RBP20.17■□□□□ 0.82
SYNE2-201ENST00000341472 DTLQ9NZJ0 730 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 SIRPGQ9P1W8 387 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 MOSPD1Q9UJG1 213 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 INTUQ9ULD6 942 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 TTLL3Q9Y4R7 772 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PCDHB1Q9Y5F3 818 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 PTPRBP23467 1997 aa20.17■□□□□ 0.82
SYNE2-201ENST00000341472 NPIPB15A6NHN6 443 aaPredicted RBP20.16■□□□□ 0.82
SYNE2-201ENST00000341472 ZNF487B1APH4 448 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 JCHAINP01591 159 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 LHCGRP22888 699 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 ETV3P41162 512 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 SLC1A1P43005 524 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 EPHB1P54762 984 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 DSC2Q02487 901 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 ODF2Q5BJF6 829 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 PERM1Q5SV97 790 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 LRRC38Q5VT99 294 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 KCTD16Q68DU8 428 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 SARM1Q6SZW1 724 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 TAF8Q7Z7C8 310 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 TSPAN33Q86UF1 283 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 CCDC13Q8IYE1 715 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 PELI3Q8N2H9 469 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 TRAF3IP1Q8TDR0 691 aaPredicted RBP20.16■□□□□ 0.82
SYNE2-201ENST00000341472 FGF11Q92914 225 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 DTD2Q96FN9 168 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 PDXPQ96GD0 296 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 CYP4F12Q9HCS2 524 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 MRPL40Q9NQ50 206 aaKnown RBP20.16■□□□□ 0.82
SYNE2-201ENST00000341472 ZFHX4Q86UP3 3567 aa20.16■□□□□ 0.82
SYNE2-201ENST00000341472 A0A087WV48 116 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 USP12O75317 370 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 CA4P22748 312 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 ACTN2P35609 894 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 MAGEA1P43355 309 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 NIPAL4Q0D2K0 466 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 IHHQ14623 411 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 TCEAL1Q15170 157 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 ISXQ2M1V0 245 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 COL28A1Q2UY09 1125 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 ALG1LQ6GMV1 187 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 CRTC1Q6UUV9 634 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 TECPR1Q7Z6L1 1165 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 FAM46DQ8NEK8 389 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 WDR48Q8TAF3 677 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 ARRDC2Q8TBH0 407 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 GRAMD1AQ96CP6 724 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 HDAC11Q96DB2 347 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 DCBLD2Q96PD2 775 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 TEX101Q9BY14 249 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 CHKBQ9Y259 395 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 HEY1Q9Y5J3 304 aa20.15■□□□□ 0.82
SYNE2-201ENST00000341472 TDRD6O60522 2096 aaKnown RBP20.15■□□□□ 0.82
SYNE2-201ENST00000341472 GOLGA6CA6NDK9 693 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 GOLGA6BA6NDN3 693 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 BRINP1O60477 761 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 GOLGA6DP0CG33 693 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 MYCLP1P12525 358 aaPredicted RBP20.14■□□□□ 0.81
SYNE2-201ENST00000341472 TNNT1P13805 278 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
SYNE2-201ENST00000341472 LSSP48449 732 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 OGFOD3Q6PK18 319 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 RBM44Q6ZP01 1051 aaKnown RBP20.14■□□□□ 0.81
SYNE2-201ENST00000341472 VSIG1Q86XK7 387 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 RHOT1Q8IXI2 618 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 LSMEM2Q8N112 164 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 LGMNQ99538 433 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 CCDC3Q9BQI4 270 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 TMEM168Q9H0V1 697 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 GOLGA6AQ9NYA3 693 aa20.14■□□□□ 0.81
SYNE2-201ENST00000341472 A0A0J9YYE9 177 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 C3orf70A6NLC5 250 aaPredicted RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 KCNK1O00180 336 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 APOL1O14791 398 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 RRP8O43159 456 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 TLX3O43711 291 aaPredicted RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 TCEA3O75764 348 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 TRBC1P01850 177 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 KRT1P04264 644 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 HLA-DQB2P05538 268 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 TEAD1P28347 426 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 NOP2P46087 812 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 RPL26P61254 145 aaKnown RBP20.13■□□□□ 0.81
SYNE2-201ENST00000341472 PTSQ03393 145 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 PDK1Q15118 436 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 SLC9A4Q6AI14 798 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 LRRC69Q6ZNQ3 347 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 RFLNAQ6ZTI6 216 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 NLRP8Q86W28 1048 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 HEATR4Q86WZ0 1026 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 PLD5Q8N7P1 536 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 KYQ8NBH2 561 aa20.13■□□□□ 0.81
SYNE2-201ENST00000341472 OR6C4Q8NGE1 309 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms