RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 APPL1Q9UKG1 709 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CD3EAPO15446 510 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 GLRA3O75311 464 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 ENO1P06733 434 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 PFKLP17858 780 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CNTFP26441 200 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 DMC1Q14565 340 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 MYLK3Q32MK0 819 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 AGAP9Q5VTM2 703 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 C16orf46Q6P387 395 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 BHLHA9Q7RTU4 235 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 GPR149Q86SP6 731 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TRAPPC5Q8IUR0 188 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SH3KBP1Q96B97 665 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 KCTD3Q9Y597 815 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 FAM92AA1XBS5 289 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TPP1O14773 563 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 MPP1Q00013 466 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 NIPAL4Q0D2K0 466 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 PTPRCAPQ14761 206 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TSTD2Q5T7W7 516 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 PACS1Q6VY07 963 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 GDPD4Q6W3E5 623 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 IL12RB2Q99665 862 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CAB39LQ9H9S4 337 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TXLNGQ9NUQ3 528 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SPATS2LQ9NUQ6 558 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TAS2R13Q9NYV9 303 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SOX13Q9UN79 622 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 TRIM33Q9UPN9 1127 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 FAM237BA0A1B0GVD1 139 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 I6L893 689 aaPredicted RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 HAUS5O94927 633 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 ALADP13716 330 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 BGNP21810 368 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 CTSOP43234 321 aaPredicted RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 UGT3A1Q6NUS8 523 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 WDR75Q8IWA0 830 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 DENND6AQ8IWF6 608 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 BRSK1Q8TDC3 778 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 KLK6Q92876 244 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 SRPK1Q96SB4 655 aaKnown RBP11.76□□□□□ -0.53
C2orf88-201ENST00000340623 P2RY13Q9BPV8 354 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 IL37Q9NZH6 218 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 ERVW-1Q9UQF0 538 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 L3MBTL1Q9Y468 752 aa11.76□□□□□ -0.53
C2orf88-201ENST00000340623 RPP40O75818 363 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 ITGA2BP08514 1039 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SOX9P48436 509 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 CHI3L2Q15782 390 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SPDYCQ5MJ68 293 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 N4BP2L1Q5TBK1 243 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SP7Q8TDD2 431 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 AGAP2Q99490 1192 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 MANSC1Q9H8J5 431 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 DOLKQ9UPQ8 538 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 TTC34A8MYJ7 566 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SHOX2O60902 331 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 ZWINTO95229 277 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 IGLV3-25P01717 112 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 IVDP26440 423 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 MAT2AP31153 395 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 HSPA14Q0VDF9 509 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SEMA3BQ13214 749 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 STX3Q13277 289 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 TAZQ16635 292 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 LRRC36Q1X8D7 754 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 AAK1Q2M2I8 961 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 MAP7D1Q3KQU3 841 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 ZNF783Q6ZMS7 281 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 LYSMD3Q7Z3D4 306 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 CAND1Q86VP6 1230 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 STK40Q8N2I9 435 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SPATA6LQ8N4H0 392 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 STYXQ8WUJ0 223 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 POLR3BQ9NW08 1133 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SLC2A6Q9UGQ3 507 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 ANKRD66B4E2M5 251 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 USP1O94782 785 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 CYP17A1P05093 508 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 TSHRP16473 764 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 HOXD9P28356 352 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 HLA-FP30511 346 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 NRG1Q02297 640 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 CYB5D1Q6P9G0 228 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 PRPF39Q86UA1 669 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 MTDHQ86UE4 582 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 IGDCC3Q8IVU1 814 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SPDYE1Q8NFV5 336 aaPredicted RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 ZNF398Q8TD17 642 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 IMP4Q96G21 291 aaKnown RBP11.75□□□□□ -0.53
C2orf88-201ENST00000340623 SYTL2Q9HCH5 934 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 HEY2Q9UBP5 337 aa11.75□□□□□ -0.53
C2orf88-201ENST00000340623 GLYATL1P3A0A0U1RQE8 302 aa11.74□□□□□ -0.53
C2orf88-201ENST00000340623 UGT1A9O60656 530 aa11.74□□□□□ -0.53
C2orf88-201ENST00000340623 DCTN3O75935 186 aa11.74□□□□□ -0.53
C2orf88-201ENST00000340623 SLC25A14O95258 325 aaPredicted RBP11.74□□□□□ -0.53
C2orf88-201ENST00000340623 CBX6O95503 412 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms