RNA–Protein interactions for RNA: ENST00000338469.3

TREM2-201, Transcript of triggering receptor expressed on myeloid cells 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM2, Length 860 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM2-201ENST00000338469 PDZD3Q86UT5 571 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 ZSWIM9Q86XI8 627 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 RYBPQ8N488 228 aaPredicted RBP11.67□□□□□ -0.54
TREM2-201ENST00000338469 NSMCE1Q8WV22 266 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 CENPTQ96BT3 561 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 FEM1CQ96JP0 617 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 EXOC2Q96KP1 924 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 TSGA13Q96PP4 275 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 QKIQ96PU8 341 aaKnown RBP eCLIP11.67□□□□□ -0.54
TREM2-201ENST00000338469 LGMNQ99538 433 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 FERMT1Q9BQL6 677 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 DNPEPQ9ULA0 475 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 PCDHB1Q9Y5F3 818 aa11.67□□□□□ -0.54
TREM2-201ENST00000338469 GCN1Q92616 2671 aaKnown RBP11.67□□□□□ -0.54
TREM2-201ENST00000338469 A0A087WV48 116 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 SPTY2D1-AS1A0A0U1RR47 76 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 CXorf51AA0A1B0GTR3 108 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 A0A1W2PNU3 283 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 K7ESM1 405 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 PDE2AO00408 941 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 PHF2O75151 1096 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 ZNF189O75820 626 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 PIGNO95427 931 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 POP4O95707 220 aaKnown RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 PRKCGP05129 697 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 IGFALSP35858 605 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 PRKD1Q15139 912 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 KCTD16Q68DU8 428 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 KIAA1161Q6NSJ0 714 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 KYAT3Q6YP21 454 aaKnown RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 B4GALNT4Q76KP1 1039 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 CCDC13Q8IYE1 715 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 RBFAQ8N0V3 343 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 DCBLD1Q8N8Z6 715 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 PRELID2Q8N945 189 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 SLC35B2Q8TB61 432 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 LRRN4Q8WUT4 740 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 PPP1R16AQ96I34 528 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 LRIG1Q96JA1 1093 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 APOLD1Q96LR9 279 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 ZNF599Q96NL3 588 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 LENG8Q96PV6 779 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 PDFQ9HBH1 243 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 DNAJC28Q9NX36 388 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 SEPT10Q9P0V9 454 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 UBA2Q9UBT2 640 aaPredicted RBP11.66□□□□□ -0.54
TREM2-201ENST00000338469 COQ6Q9Y2Z9 468 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 RAI2Q9Y5P3 530 aa11.66□□□□□ -0.54
TREM2-201ENST00000338469 RP1P56715 2156 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CFAP69A5D8W1 941 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 A6NNZ2 444 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CCDC188H7C350 402 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 SCAMP1O15126 338 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 MATN3O15232 486 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 MTSS1O43312 755 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 TSPAN6O43657 245 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 GCATO75600 419 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 MT-CO3P00414 261 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CSF2P04141 144 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CELA2BP08218 269 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 CKMT1AP12532 417 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 RBL1P28749 1068 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 SNRPD1P62314 119 aaKnown RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 C1orf61Q13536 156 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 PDE1CQ14123 709 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 LBRQ14739 615 aaKnown RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 RTP5Q14D33 572 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CYP1B1Q16678 543 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 TMCO4Q5TGY1 634 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CDCP2Q5VXM1 449 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 DRICH1Q6PGQ1 229 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 GDPD4Q6W3E5 623 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 ZNF572Q7Z3I7 529 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 TTC7BQ86TV6 843 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 BBS5Q8N3I7 341 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 TP53I13Q8NBR0 393 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 ZNF548Q8NEK5 533 aaPredicted RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 HTR3CQ8WXA8 447 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 CASKIN2Q8WXE0 1202 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 FATE1Q969F0 183 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 MAGOHBQ96A72 148 aaKnown RBP11.65□□□□□ -0.54
TREM2-201ENST00000338469 COL26A1Q96A83 441 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 HAUS2Q9NVX0 235 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 ZNF148Q9UQR1 794 aa11.65□□□□□ -0.54
TREM2-201ENST00000338469 PTPRQQ9UMZ3 2332 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 MGAQ8IWI9 3026 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 PMS2P1A4D2B8 440 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 KCNK1O00180 336 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 MUSKO15146 869 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 KCNN4O15554 427 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 OPA1O60313 960 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 STK10O94804 968 aaKnown RBP11.64□□□□□ -0.55
TREM2-201ENST00000338469 CCNB1P14635 433 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 NME1P15531 152 aaKnown RBP11.64□□□□□ -0.55
TREM2-201ENST00000338469 COILP38432 576 aaPredicted RBP11.64□□□□□ -0.55
TREM2-201ENST00000338469 EIF2S3P41091 472 aaKnown RBP11.64□□□□□ -0.55
TREM2-201ENST00000338469 FNTAP49354 379 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 RENBPP51606 427 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 C2orf54Q08AI8 447 aa11.64□□□□□ -0.55
TREM2-201ENST00000338469 CCDC15Q0P6D6 951 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms