RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 DENND6BQ8NEG7 585 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 BRSK1Q8TDC3 778 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 BLOC1S5Q8TDH9 187 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 SMIM14Q96QK8 99 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 EBF2Q9HAK2 575 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 PKD2L2Q9NZM6 624 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 RAPGEFL1Q9UHV5 662 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 SHOC2Q9UQ13 582 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF711Q9Y462 761 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 MRFAP1Q9Y605 127 aa11.92□□□□□ -0.5
SPTLC1-202ENST00000337841 SHROOM3Q8TF72 1996 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CTAGE15A4D2H0 777 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 GOLGA8CPA6NN73 597 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 NDC80O14777 642 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 KHNYNO15037 678 aaKnown RBP11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CTAGE8P0CG41 777 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TPH1P17752 444 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TPSB2P20231 275 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 LHCGRP22888 699 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CD38P28907 300 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 MPLP40238 635 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 NPY2RP49146 381 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 AFF3P51826 1226 aaKnown RBP11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 STC1P52823 247 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 PDE1BQ01064 536 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 C2orf54Q08AI8 447 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 OVGP1Q12889 678 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 FGL2Q14314 439 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TPSAB1Q15661 275 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CDKN3Q16667 212 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 ZDHHC20Q5W0Z9 365 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 DENND5AQ6IQ26 1287 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 Q6ZVL8 140 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 LYSMD3Q7Z3D4 306 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 HSD11B1LQ7Z5J1 315 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TECPR1Q7Z6L1 1165 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CTAGE6Q86UF2 777 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 NLRP8Q86W28 1048 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 JAMLQ86YT9 394 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CTAGE4Q8IX94 777 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 MFSD2AQ8NA29 543 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 OR52K1Q8NGK4 314 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 C1orf216Q8TAB5 229 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 RUBCNQ92622 972 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CENPTQ96BT3 561 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 KLHDC7BQ96G42 594 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 CDH19Q9H159 772 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 FAM83DQ9H4H8 585 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TM9SF3Q9HD45 589 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TMEM74BQ9NUR3 256 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 SLC6A14Q9UN76 642 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 COQ6Q9Y2Z9 468 aa11.91□□□□□ -0.5
SPTLC1-202ENST00000337841 TOR1BO14657 336 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 STX7O15400 261 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 TTI1O43156 1089 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 LRP3O75074 770 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 CFIP05156 583 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 PYGLP06737 847 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 LPOP22079 712 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 HMGCLP35914 325 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 ETV3P41162 512 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 MAGEA6P43360 314 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 SPINT3P49223 89 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 TERF1P54274 439 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 C21orf59P57076 290 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 OLIG2Q13516 323 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 TAF1AQ15573 450 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 WSCD2Q2TBF2 565 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 PEAR1Q5VY43 1037 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 ZNF765Q7L2R6 523 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 GLT6D1Q7Z4J2 308 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 IQCHQ86VS3 1027 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 DCP2Q8IU60 420 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 PPIL6Q8IXY8 311 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 ZCCHC9Q8N567 271 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 GPR161Q8N6U8 529 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 BBOF1Q8ND07 529 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 NUS1Q96E22 293 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 SLC6A18Q96N87 628 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 KLF6Q99612 283 aaPredicted RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 MYOCQ99972 504 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 HINFPQ9BQA5 517 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 ORAI3Q9BRQ5 295 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 NUSAP1Q9BXS6 441 aaKnown RBP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 CASS4Q9NQ75 786 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 BFARQ9NZS9 450 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 PKP3Q9Y446 797 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 SPO11Q9Y5K1 396 aa11.9□□□□□ -0.5
SPTLC1-202ENST00000337841 A0A0U1RQS6 177 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 A6NNZ2 444 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 EFCAB8A8MWE9 144 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 SMAPO00193 183 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 TLR4O00206 839 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 DNALI1O14645 258 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 VILLO15195 856 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 RAD51BO15315 384 aa11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 FOXD2O60548 495 aaPredicted RBP11.89□□□□□ -0.51
SPTLC1-202ENST00000337841 PPFIA2O75334 1257 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms