RNA–Protein interactions for RNA: ENST00000337571.8

CAPN3-202, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,271 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-202ENST00000337571 ITKQ08881 620 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 RALGDSQ12967 914 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 DPYSQ14117 519 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 KRT81Q14533 505 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 DPYSL2Q16555 572 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 FIGNQ5HY92 759 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 CCDC122Q5T0U0 273 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 CAVIN1Q6NZI2 390 aaKnown RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 CCDC81Q6ZN84 652 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 RAB11FIP2Q7L804 512 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 POLNQ7Z5Q5 900 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 ZNF605Q86T29 641 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 JAMLQ86YT9 394 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 ATPAF2Q8N5M1 289 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 KIAA1524Q8TCG1 905 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 OR1E3Q8WZA6 343 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 NUS1Q96E22 293 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 PDXPQ96GD0 296 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 LIN37Q96GY3 246 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 NUDCD1Q96RS6 583 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 MRPL40Q9NQ50 206 aaKnown RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 PHPT1Q9NRX4 125 aaPredicted RBP10.68□□□□□ -0.7
CAPN3-202ENST00000337571 GOLGA6AQ9NYA3 693 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 LRIT1Q9P2V4 623 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 B4GALT6Q9UBX8 382 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 MGAQ8IWI9 3026 aa10.68□□□□□ -0.7
CAPN3-202ENST00000337571 RP1P56715 2156 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CDRT15L2A8MXV6 281 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 B4DGG1 531 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 MYO1FO00160 1098 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 RARAP10276 462 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 MYCLP1P12525 358 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 VIPR1P32241 457 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 MMP13P45452 471 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CFHR1Q03591 330 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 HADHQ16836 314 aaKnown RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 ZSCAN23Q3MJ62 389 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 C14orf28Q4W4Y0 310 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 RALGPS1Q5JS13 557 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 ARMC12Q5T9G4 340 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 OGFOD3Q6PK18 319 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CYP4V2Q6ZWL3 525 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CCNJLQ8IV13 435 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 GPR156Q8NFN8 814 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CPLX3Q8WVH0 158 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 TEKT4Q8WW24 435 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 SYN2Q92777 582 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM159Q96B96 161 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 WBP1Q96G27 269 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 PRR11Q96HE9 360 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CSPG4P5Q96PW8 444 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 LGR4Q9BXB1 951 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 GSDMCQ9BYG8 508 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 FOXP3Q9BZS1 431 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 TMEM168Q9H0V1 697 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 SUDS3Q9H7L9 328 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 CARS2Q9HA77 564 aaKnown RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 NOD2Q9HC29 1040 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 FGF22Q9HCT0 170 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 AKAP7Q9P0M2 348 aaPredicted RBP10.67□□□□□ -0.7
CAPN3-202ENST00000337571 RABGEF1Q9UJ41 708 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 ANAPC7Q9UJX3 599 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 APPL1Q9UKG1 709 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 VPS9D1Q9Y2B5 631 aa10.67□□□□□ -0.7
CAPN3-202ENST00000337571 LRP4O75096 1905 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 GCN1Q92616 2671 aaKnown RBP10.66□□□□□ -0.7
CAPN3-202ENST00000337571 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-202ENST00000337571 PRSS38A1L453 326 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 RHPN2P1A8MT19 583 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 D6RAR5 112 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 GOLGA6L19H0YKK7 550 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 MAP3K7O43318 606 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 HTRA2O43464 458 aaPredicted RBP10.66□□□□□ -0.7
CAPN3-202ENST00000337571 NUDT21O43809 227 aaKnown RBP10.66□□□□□ -0.7
CAPN3-202ENST00000337571 MAFKO60675 156 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 SERPING1P05155 500 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CES1P23141 567 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 IL1R2P27930 398 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CCKBRP32239 447 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 UGT1A5P35504 534 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 UBASH3AP57075 661 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 ILF3Q12906 894 aaKnown RBP eCLIP10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CNGA3Q16281 694 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CERCAMQ5T4B2 595 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 SPECC1LQ69YQ0 1117 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 NYAP1Q6ZVC0 841 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 USP45Q70EL2 814 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 B3GNT8Q7Z7M8 397 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CLEC14AQ86T13 490 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 PIM3Q86V86 326 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 LRRC49Q8IUZ0 686 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 TP53INP2Q8IXH6 220 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 IQCDQ96DY2 449 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 SCRN2Q96FV2 425 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 COQ10AQ96MF6 247 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 CMKLR1Q99788 373 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 NUP85Q9BW27 656 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 TEX101Q9BY14 249 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 THAP2Q9H0W7 228 aa10.66□□□□□ -0.7
CAPN3-202ENST00000337571 PCDH18Q9HCL0 1135 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms