RNA–Protein interactions for RNA: ENST00000332345.10

LIMS1-201, Transcript of LIM zinc finger domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIMS1, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-201ENST00000332345 MT-CYBP00156 380 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-201ENST00000332345 EPOP01588 193 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 CSF2P04141 144 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 LHCGRP22888 699 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 EPHA8P29322 1005 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-201ENST00000332345 CD68P34810 354 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-201ENST00000332345 PTSQ03393 145 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 KLF1Q13351 362 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-201ENST00000332345 FZD2Q14332 565 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 PTPRRQ15256 657 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 PCSK7Q16549 785 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 QPCTQ16769 361 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 FAM182AQ5T1J6 154 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 LRRC66Q68CR7 880 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 PNCKQ6P2M8 343 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 HSD11B1LQ7Z5J1 315 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 TSPAN33Q86UF1 283 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 GATAD2AQ86YP4 633 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 BTN2A2Q8WVV5 523 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 NUS1Q96E22 293 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 PDLIM2Q96JY6 352 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 LYSMD1Q96S90 227 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 FRMD8P1Q9BZ68 369 aaPredicted RBP14.02□□□□□ -0.17
LIMS1-201ENST00000332345 CARD9Q9H257 536 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 C10orf88Q9H8K7 445 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 UBP1Q9NZI7 540 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 RSPH14Q9UHP6 348 aa14.02□□□□□ -0.17
LIMS1-201ENST00000332345 CACNB4O00305 520 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-201ENST00000332345 PDE2AO00408 941 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-201ENST00000332345 GIPC1O14908 333 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 CBFA2T3O75081 653 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ANXA9O76027 345 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 CLDN7O95471 211 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 NDST3O95803 873 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 HOXC4P09017 264 aaPredicted RBP14.01□□□□□ -0.17
LIMS1-201ENST00000332345 GM2AP17900 193 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 NFKB1P19838 968 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 DGKAP23743 735 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 TRIM23P36406 574 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ETV3P41162 512 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 BLKP51451 505 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 MPP3Q13368 585 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 PRPSAP1Q14558 356 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 HS1BP3Q53T59 392 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ANKRD20A2Q5SQ80 823 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 FAXCQ5TGI0 409 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ANKRD20A1Q5TYW2 823 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ANKRD20A3Q5VUR7 823 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 ESRP1Q6NXG1 681 aaKnown RBP14.01□□□□□ -0.17
LIMS1-201ENST00000332345 MACC1Q6ZN28 852 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 Q6ZVL8 140 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 TECPR1Q7Z6L1 1165 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 NLRP8Q86W28 1048 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 NRSN1Q8IZ57 195 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 DTD2Q96FN9 168 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 PPP1R2P1Q96PQ5 205 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 TRIB3Q96RU7 358 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 FAM118BQ9BPY3 351 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 SLC13A1Q9BZW2 595 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 USP29Q9HBJ7 922 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 MAGEE1Q9HCI5 957 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 AAR2Q9Y312 384 aaKnown RBP14.01□□□□□ -0.17
LIMS1-201ENST00000332345 OR1A2Q9Y585 309 aa14.01□□□□□ -0.17
LIMS1-201ENST00000332345 SPTBN2O15020 2390 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 C1orf232A0A0U1RR37 186 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 LOC285095A0A1B0GVY8 99 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 RGSL1A5PLK6 1076 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 C5orf60A6NFR6 353 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 PIAS2O75928 621 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 PYGLP06737 847 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 NME1P15531 152 aaKnown RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 TSHRP16473 764 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 JUNDP17535 347 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 KELP23276 732 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 MSNP26038 577 aaKnown RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 STIP1P31948 543 aaKnown RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 STC1P52823 247 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 GEMP55040 296 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 WNT3AP56704 352 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 SIM1P81133 766 aaPredicted RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 PPARDQ03181 441 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 DPTQ07507 201 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 GALNT3Q14435 633 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 NFATC4Q14934 902 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 ZNF542PQ5EBM4 170 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 N4BP2L1Q5TBK1 243 aaPredicted RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 ENPP7Q6UWV6 458 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 GLRX5Q86SX6 157 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 SLC13A5Q86YT5 568 aaPredicted RBP14□□□□□ -0.17
LIMS1-201ENST00000332345 EID2Q8N6I1 236 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 PLA2G15Q8NCC3 412 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 MAIP1Q8WWC4 291 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 LRRC45Q96CN5 670 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 SMIM14Q96QK8 99 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 TLR10Q9BXR5 811 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 GBA3Q9H227 469 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 ZFYVE1Q9HBF4 777 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 BTBD3Q9Y2F9 522 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 JRKLQ9Y4A0 524 aa14□□□□□ -0.17
LIMS1-201ENST00000332345 ARID1BQ8NFD5 2236 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms