RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 ERN2Q76MJ5 926 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 MARK2Q7KZI7 788 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 TSPAN33Q86UF1 283 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 GJD3Q8N144 294 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SIX5Q8N196 739 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 OR4K2Q8NGD2 314 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 EPS8L3Q8TE67 593 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ERLEC1Q96DZ1 483 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 DHRS4Q9BTZ2 278 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 IL17CQ9P0M4 197 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SLC24A2Q9UI40 661 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 GGT7Q9UJ14 662 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SLC7A4O43246 635 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SPINT1O43278 529 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ERVK-10P10266 1014 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ADRB3P13945 408 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 GCAP28676 217 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 HADHAP40939 763 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 ELP6Q0PNE2 266 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 KRT71Q3SY84 523 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 FBXL19Q6PCT2 694 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 Q6ZS52 159 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 TTC7BQ86TV6 843 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 TDRPQ86YL5 185 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 RIBC1Q8N443 379 aaPredicted RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 SLC44A1Q8WWI5 657 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 RAB7BQ96AH8 199 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 NELL2Q99435 816 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 PAFAH2Q99487 392 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 FAM167BQ9BTA0 163 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 MFSD1Q9H3U5 465 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 PPANQ9NQ55 473 aaKnown RBP10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 IL1RAPL1Q9NZN1 696 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 PKP3Q9Y446 797 aa10.25□□□□□ -0.77
VIPAS39-201ENST00000327028 A0A0U1RQS6 177 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CXorf49A8MYA2 514 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 RASGRF2O14827 1237 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 MID1O15344 667 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CLDN7O95471 211 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 P2RY2P41231 377 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 STC1P52823 247 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PRAMEP78395 509 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 RALGDSQ12967 914 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PTPRCAPQ14761 206 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 UBXN2BQ14CS0 331 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 RASA2Q15283 850 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 AFTPHQ6ULP2 937 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 LRRC6Q86X45 466 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CNTN4Q8IWV2 1026 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CTAGE3PQ8IX95 158 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 AADATQ8N5Z0 425 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PPM1NQ8N819 430 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 HDAC10Q969S8 669 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PBXIP1Q96AQ6 731 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 EID2BQ96D98 161 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 TBATAQ96M53 351 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 SH3GL2Q99962 352 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 LMAN1LQ9HAT1 526 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 NSMCE4AQ9NXX6 385 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 ZFATQ9P243 1243 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 MUTYHQ9UIF7 546 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 GOLGA6L10A6NI86 522 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 POC1B-GALNT4F8VUJ3 575 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 H7C0S8 307 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 AREL1O15033 823 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 OPA1O60313 960 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CDH16O75309 829 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 C1SP09871 688 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 DRD3P35462 400 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 TMPRSS15P98073 1019 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 SEMG2Q02383 582 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 ZBTB16Q05516 673 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CNTN1Q12860 1018 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 THOC5Q13769 683 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 ARHGEF7Q14155 803 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 SMAD1Q15797 465 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 HSP90AA5PQ58FG0 334 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PIP5KL1Q5T9C9 394 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 TEDDM1Q5T9Z0 273 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 LMNTD2Q8IXW0 634 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CALML6Q8TD86 181 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CDKN2AIPNLQ96HQ2 116 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 SGSM3Q96HU1 749 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 MKRN2Q9H000 416 aaKnown RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 TBC1D17Q9HA65 648 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 EURLQ9NYK6 297 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 PSMC3IPQ9P2W1 217 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 LGALS13Q9UHV8 139 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 FKBPLQ9UIM3 349 aa10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 MTF2Q9Y483 593 aaPredicted RBP10.24□□□□□ -0.77
VIPAS39-201ENST00000327028 CCDC162PA2VCL2 907 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 SMIM23A6NLE4 172 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 A8MX80 341 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 H0Y858 1186 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 PLK4O00444 970 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 CCL22O00626 93 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 PIAS1O75925 651 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 GOT2P00505 430 aaKnown RBP10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 MYZAPP0CAP1 466 aa10.23□□□□□ -0.77
VIPAS39-201ENST00000327028 MSH2P43246 934 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms