RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 C14orf80Q86SX3 495 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 RNF135Q8IUD6 432 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 HERC6Q8IVU3 1022 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 PACRGLQ8N7B6 248 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 ANKRD49Q8WVL7 239 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 RSPH1Q8WYR4 309 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 ERVK-6Q9BXR3 956 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 TLR6Q9Y2C9 796 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 C7orf72A4D263 438 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 UBFD1O14562 309 aaKnown RBP19.91■□□□□ 0.78
SOX2-201ENST00000325404 BTG3Q14201 252 aaPredicted RBP19.91■□□□□ 0.78
SOX2-201ENST00000325404 GK3PQ14409 553 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 DSC3Q14574 896 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 FAM26DQ5JW98 314 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 MARC1Q5VT66 337 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 ZNF683Q8IZ20 524 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 GPR150Q8NGU9 434 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 LRTOMTQ8WZ04 291 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 SLC39A13Q96H72 371 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 GPATCH1Q9BRR8 931 aaKnown RBP19.91■□□□□ 0.78
SOX2-201ENST00000325404 GRIP2Q9C0E4 1043 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 PRDM5Q9NQX1 630 aaPredicted RBP19.91■□□□□ 0.78
SOX2-201ENST00000325404 NDUFAF1Q9Y375 327 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 SQORQ9Y6N5 450 aa19.91■□□□□ 0.78
SOX2-201ENST00000325404 MSI1O43347 362 aaKnown RBP19.9■□□□□ 0.78
SOX2-201ENST00000325404 INHAP05111 366 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 GPX3P22352 226 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 PCSK7Q16549 785 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 UNC50Q53HI1 259 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 PPP4R4Q6NUP7 873 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 DHFR2Q86XF0 187 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 SPATA2LQ8IUW3 424 aaPredicted RBP19.9■□□□□ 0.78
SOX2-201ENST00000325404 PHF21BQ96EK2 531 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 C19orf60Q96EN9 201 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 SUSD3Q96L08 255 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 TMEM248Q9NWD8 314 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 MPP6Q9NZW5 540 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 RNF11Q9Y3C5 154 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 FIS1Q9Y3D6 152 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 A0A0U1RQF3 1178 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 TMCC1O94876 653 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 MMP2P08253 660 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 ZNF23P17027 643 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 FDXRP22570 491 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 BRCC3P46736 316 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 SUOXP51687 545 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 ATXN3P54252 364 aaPredicted RBP19.9■□□□□ 0.78
SOX2-201ENST00000325404 TUBA4AP68366 448 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 TUSC3Q13454 348 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 PABPC1LQ4VXU2 614 aaKnown RBP19.9■□□□□ 0.78
SOX2-201ENST00000325404 COQ5Q5HYK3 327 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 TRPC4APQ8TEL6 797 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 ADAM2Q99965 735 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 ABCD2Q9UBJ2 740 aa19.9■□□□□ 0.78
SOX2-201ENST00000325404 NLRC5Q86WI3 1866 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 LOC285095A0A1B0GVY8 99 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 AQP12BA6NM10 295 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 H6PDO95479 791 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 BIRC2Q13490 618 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 TMEM207Q6UWW9 146 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 KDELC2Q7Z4H8 507 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 AQP12AQ8IXF9 295 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 OR2T34Q8NGX1 318 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 OR2T3Q8NH03 318 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 RHEBL1Q8TAI7 183 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 TSEN34Q9BSV6 310 aaKnown RBP19.89■□□□□ 0.77
SOX2-201ENST00000325404 TRIM15Q9C019 465 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 NT5MQ9NPB1 228 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 TIMMDC1Q9NPL8 285 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 PNPLA3Q9NST1 481 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 RIMKLBQ9ULI2 386 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 ATP6V1B1P15313 513 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 CD86P42081 329 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 CDKN2DP55273 166 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 FUNDC1Q8IVP5 155 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 SLAIN1Q8ND83 568 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 TSPAN14Q8NG11 270 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 HM13Q8TCT9 377 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 TMEM209Q96SK2 561 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 ANKRD60Q9BZ19 345 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 ZYG11BQ9C0D3 744 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 ALG9Q9H6U8 611 aa19.89■□□□□ 0.77
SOX2-201ENST00000325404 HMX1Q9NP08 348 aaPredicted RBP19.89■□□□□ 0.77
SOX2-201ENST00000325404 HTTP42858 3142 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 SUPT7LO94864 414 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 GRIK1P39086 918 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 NOMO2Q5JPE7 1267 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 PIK3R6Q5UE93 754 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 MON1AQ86VX9 555 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 MINDY1Q8N5J2 469 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 HDAC10Q969S8 669 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 TBRG4Q969Z0 631 aaKnown RBP eCLIP19.88■□□□□ 0.77
SOX2-201ENST00000325404 CNOT6Q9ULM6 557 aaKnown RBP19.88■□□□□ 0.77
SOX2-201ENST00000325404 SCML2Q9UQR0 700 aa19.88■□□□□ 0.77
SOX2-201ENST00000325404 IGLV3-10A0A075B6K4 115 aa19.87■□□□□ 0.77
SOX2-201ENST00000325404 MATN4O95460 622 aa19.87■□□□□ 0.77
SOX2-201ENST00000325404 HSD17B1P14061 328 aa19.87■□□□□ 0.77
SOX2-201ENST00000325404 CD1DP15813 335 aa19.87■□□□□ 0.77
SOX2-201ENST00000325404 ALDH3B2P48448 385 aa19.87■□□□□ 0.77
SOX2-201ENST00000325404 KCNC1P48547 511 aa19.87■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms