RNA–Protein interactions for RNA: ENST00000322918.9

CD46-202, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,124 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-202ENST00000322918 Q6ZNB5 142 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 Q6ZVU0 165 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CYS1Q717R9 158 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CHST9Q7L1S5 443 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 LYSMD3Q7Z3D4 306 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CRLF3Q8IUI8 442 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CILP2Q8IUL8 1156 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 ANKRD49Q8WVL7 239 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CCDC97Q96F63 343 aaPredicted RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 NUDCD1Q96RS6 583 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 PAPOLBQ9NRJ5 636 aaKnown RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 HSFX1Q9UBD0 423 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 SLC12A4Q9UP95 1085 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 YBX2Q9Y2T7 364 aaKnown RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 STARD13Q9Y3M8 1113 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CLASP2O75122 1294 aaKnown RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 ZMPSTE24O75844 475 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 HSPA4LO95757 839 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 HLA-DPA1P20036 260 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CREMQ03060 361 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 TNK2Q07912 1038 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 MESP2Q0VG99 397 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 PLEKHG6Q3KR16 790 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 ARHGAP15Q53QZ3 475 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 ATG16L1Q676U5 607 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 KIAA0930Q6ICG6 404 aaPredicted RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 RETSATQ6NUM9 610 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 PIANPQ8IYJ0 282 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CENPLQ8N0S6 344 aaPredicted RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 OR4L1Q8NH43 312 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 BRSK1Q8TDC3 778 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 HEXDCQ8WVB3 486 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 HERVK_113Q902F9 699 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 CDKN2AIPNLQ96HQ2 116 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 FEM1CQ96JP0 617 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 LRRC3BQ96PB8 259 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 TSC22D3Q99576 134 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 GPR22Q99680 433 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 PRKD2Q9BZL6 878 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 MTIF3Q9H2K0 278 aaKnown RBP9.13□□□□□ -0.95
CD46-202ENST00000322918 ALG9Q9H6U8 611 aa9.13□□□□□ -0.95
CD46-202ENST00000322918 C1orf232A0A0U1RR37 186 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 CCDC85CA6NKD9 419 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 C2orf81A6NN90 581 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 AHCYL1O43865 530 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 SMIM24O75264 130 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 MOSPD3O75425 235 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ZNF189O75820 626 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 GSRP00390 522 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT2B4P06133 528 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 FGF3P11487 239 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 HNRNPLP14866 589 aaKnown RBP eCLIP9.12□□□□□ -0.951e-6■□□□□ 10.5
CD46-202ENST00000322918 MC4RP32245 332 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 MAGEA10P43363 369 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 SLC18A1P54219 525 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ITIH4Q14624 930 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGP2Q16851 508 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 MPPE1Q53F39 396 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ARMC12Q5T9G4 340 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 PSAPL1Q6NUJ1 521 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 GET4Q7L5D6 327 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 UBE2Q1Q7Z7E8 422 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 TSPAN33Q86UF1 283 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 C2CD4AQ8NCU7 369 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 KCNV2Q8TDN2 545 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 C10orf82Q8WW14 230 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 OSBPL1AQ9BXW6 950 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 CATSPERZQ9NTU4 200 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UTP6Q9NYH9 597 aaKnown RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 LHX3Q9UBR4 397 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 CD84Q9UIB8 345 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ZFP69BQ9UJL9 534 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 USH1CQ9Y6N9 552 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ATG2BQ96BY7 2078 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 CLDN7O95471 211 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT1A6P19224 532 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT1A1P22309 533 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT1A4P22310 534 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT1A3P35503 534 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 UGT1A5P35504 534 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 HADHAP40939 763 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 BCL2L1Q07817 233 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 MSLNQ13421 630 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 SLC12A1Q13621 1099 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 PDCD2Q16342 344 aaPredicted RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 C5orf22Q49AR2 442 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 RARS2Q5T160 578 aaKnown RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 HECTD2Q5U5R9 776 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 MBLAC2Q68D91 279 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 KYAT3Q6YP21 454 aaKnown RBP9.12□□□□□ -0.95
CD46-202ENST00000322918 TIFABQ6ZNK6 161 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 HTR3DQ70Z44 454 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ADGRE3Q9BY15 652 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 EBF3Q9H4W6 596 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 ARNT2Q9HBZ2 717 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 GALPQ9UBC7 116 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 PRKAG3Q9UGI9 489 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 NOTCH4Q99466 2003 aa9.12□□□□□ -0.95
CD46-202ENST00000322918 DPPA5A6NC42 116 aa9.11□□□□□ -0.95
CD46-202ENST00000322918 MROH6A6NGR9 719 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms