RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 PHF24Q9UPV7 400 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 SIX3O95343 332 aaPredicted RBP15.29■□□□□ 0.04
VARS2-201ENST00000321897 HGFP14210 728 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 FCGRTP55899 365 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 UBR7Q8N806 425 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 ANKLE1Q8NAG6 615 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 OR7D4Q8NG98 312 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 SLC39A8Q9C0K1 460 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 HMG20AQ9NP66 347 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 ZNF112Q9UJU3 913 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 PRPF19Q9UMS4 504 aaKnown RBP15.29■□□□□ 0.04
VARS2-201ENST00000321897 SLX4Q8IY92 1834 aa15.29■□□□□ 0.04
VARS2-201ENST00000321897 MATN2O00339 956 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 HS6ST1O60243 411 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 VPS26AO75436 327 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 RFPL1O75677 317 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 SLC2A4P14672 509 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 GGT5P36269 586 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 MADCAM1Q13477 382 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 LIPMQ5VYY2 423 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 NCCRP1Q6ZVX7 275 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 FBXO30Q8TB52 745 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 TMEM169Q96HH4 297 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 RBBP8Q99708 897 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 C16orf70Q9BSU1 422 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 MARCH7Q9H992 704 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 KCTD3Q9Y597 815 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 SCN9AQ15858 1988 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 DDX60LQ5H9U9 1706 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 DHRS12A0PJE2 317 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 TLR5O60602 858 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 ASGR1P07306 291 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 PRKAR2AP13861 404 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 TPSB2P20231 275 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 AXLP30530 894 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 MAGEA10P43363 369 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 CCNIQ14094 377 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 BOP1Q14137 746 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 TPSAB1Q15661 275 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 ATP6AP1LQ52LC2 224 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 IFNLR1Q8IU57 520 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 P3H2Q8IVL5 708 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 OR9I1Q8NGQ6 314 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 AGO3Q9H9G7 860 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 SPAG4Q9NPE6 437 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 PLCH1Q4KWH8 1693 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 SMIM35A0A1B0GVV1 85 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 COL9A2Q14055 689 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 ABRAXAS1Q6UWZ7 409 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 DET1Q7L5Y6 550 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 SHKBP1Q8TBC3 707 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 TAMM41Q96BW9 452 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 COQ7Q99807 217 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 C9orf16Q9BUW7 83 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 RHOJQ9H4E5 214 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 ENTPD7Q9NQZ7 604 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 TBC1D13Q9NVG8 400 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 NDUFAF1Q9Y375 327 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 RAP2CQ9Y3L5 183 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 PCDHB9Q9Y5E1 797 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 BTAF1O14981 1849 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 CNOT3O75175 753 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 PPP3CCP48454 512 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 LIMK2P53671 638 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 ST13P5Q8NFI4 369 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 ACTRT2Q8TDY3 377 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 NSMCE2Q96MF7 247 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 TCF12Q99081 682 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 SSU72Q9NP77 194 aaKnown RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 TEKT2Q9UIF3 430 aa15.28■□□□□ 0.04
VARS2-201ENST00000321897 CAB39Q9Y376 341 aaPredicted RBP15.28■□□□□ 0.04
VARS2-201ENST00000321897 LOC100506127A0A0U1RQW1 187 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 AXIN1O15169 862 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 WDR47O94967 919 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 ALDOAP04075 364 aaKnown RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 IGFBP6P24592 240 aaPredicted RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 RPL10P27635 214 aaKnown RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 PPP1R8Q12972 351 aaKnown RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 DDX53Q86TM3 631 aaKnown RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 CLHC1Q8NHS4 586 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 HEXDCQ8WVB3 486 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 SOX17Q9H6I2 414 aaPredicted RBP15.27■□□□□ 0.04
VARS2-201ENST00000321897 RAD54BQ9Y620 910 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 U3KQV3 271 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 ADAMTS7Q9UKP4 1686 aa15.27■□□□□ 0.04
VARS2-201ENST00000321897 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 NADKO95544 446 aaPredicted RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 LTA4HP09960 611 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 TIGD2Q4W5G0 525 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 RBM20Q5T481 1227 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 PIM3Q86V86 326 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 OR7A2PQ8NGA2 310 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 C12orf43Q96C57 262 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 TLR8Q9NR97 1041 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 VWA7Q9Y334 891 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 DDX60Q8IY21 1712 aaKnown RBP15.27■□□□□ 0.03
VARS2-201ENST00000321897 A0A1W2PQ67 120 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 IQCF5A8MTL0 148 aa15.27■□□□□ 0.03
VARS2-201ENST00000321897 F8W810 466 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms