RNA–Protein interactions for RNA: ENST00000319980.10

IFT88-201, Transcript of intraflagellar transport 88, humanhuman

TSL 1 (best) BASIC

Gene IFT88, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-201ENST00000319980 PEX6Q13608 980 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CDH18Q13634 790 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SLC14A2Q15849 920 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 LSM12Q3MHD2 195 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 PREPLQ4J6C6 727 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 DNAL1Q4LDG9 190 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ACSBG2Q5FVE4 666 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SH2D4BQ5SQS7 431 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 WLSQ5T9L3 541 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 METTL21CQ5VZV1 264 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 NXNQ6DKJ4 435 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 FAM45BPQ6NSW5 357 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PIWIL4Q7Z3Z4 852 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 FAM45AQ8TCE6 357 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CMTM5Q96DZ9 223 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PAWRQ96IZ0 340 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 FEM1AQ9BSK4 669 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 HERC2P3Q9BVR0 1158 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 EBF2Q9HAK2 575 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 RC3H2Q9HBD1 1191 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TYW5A2RUC4 315 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 C2orf81A6NN90 581 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 A8MT66 165 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ANKRD66B4E2M5 251 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 MAGEC1O60732 1142 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CKMP06732 381 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 GABRR2P28476 465 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CPOXP36551 454 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SERPINB5P36952 375 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ABL2P42684 1182 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 STC1P52823 247 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 CYP4F8P98187 520 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 LRRC26Q2I0M4 334 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PABPC1LQ4VXU2 614 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 ISCA2Q86U28 154 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 SCUBE1Q8IWY4 988 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 EFHBQ8N7U6 833 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 MAB21L3Q8N8X9 362 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 ADAMTS19Q8TE59 1207 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 LENG8Q96PV6 779 aaPredicted RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 ZBED2Q9BTP6 218 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 C1orf21Q9H246 121 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 DCLRE1BQ9H816 532 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PLK2Q9NYY3 685 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 PLA2G4CQ9UP65 541 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 FAM50BQ9Y247 325 aa7.58□□□□□ -1.2
IFT88-201ENST00000319980 FCF1Q9Y324 198 aaKnown RBP7.58□□□□□ -1.2
IFT88-201ENST00000319980 TRIM43BA6NCK2 446 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TM7SF2O76062 418 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 MT-CO1P00395 513 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 RPSAP08865 295 aaKnown RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 CNPP09543 421 aaKnown RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 CD1EP15812 388 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 RAG1P15918 1043 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 DNAJB13P59910 316 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 PFKPQ01813 784 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 KLF10Q13118 480 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TAF1AQ15573 450 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 EML3Q32P44 896 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 RALGPS1Q5JS13 557 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TMEM198Q66K66 360 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 FRMD7Q6ZUT3 714 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 ITIH5Q86UX2 942 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 CMTR2Q8IYT2 770 aaKnown RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 ULK2Q8IYT8 1036 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 KDM1BQ8NB78 822 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 GPR150Q8NGU9 434 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 WFDC5Q8TCV5 224 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 EXT2Q93063 718 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TRIM43Q96BQ3 446 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 CCDC126Q96EE4 140 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 CNDP1Q96KN2 507 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 ADGRE3Q9BY15 652 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 IL21Q9HBE4 155 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 BPIFA1Q9NP55 256 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 NLE1Q9NVX2 485 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 VTI1BQ9UEU0 232 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 SLC7A8Q9UHI5 535 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 STOML2Q9UJZ1 356 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 SSX2IPQ9Y2D8 614 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 PCDHB9Q9Y5E1 797 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 SLCO1B7G3V0H7 640 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 K7ERQ8 282 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TGM5O43548 720 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 NPHS1O60500 1241 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 GREM1O60565 184 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 FGF18O76093 207 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 GJA1P17302 382 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 TSPAN8P19075 237 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 FDXRP22570 491 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 FMO4P31512 558 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 RFC2P35250 354 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 CSKP41240 450 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 CDKN1CP49918 316 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 RAP1GDS1P52306 607 aa7.57□□□□□ -1.2
IFT88-201ENST00000319980 GTF2A1P52655 376 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 ZNF140P52738 457 aaPredicted RBP7.57□□□□□ -1.2
IFT88-201ENST00000319980 SESN3P58005 492 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms