RNA–Protein interactions for RNA: ENST00000316433.8

ZNF540-201, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF540, Length 3,099 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-201ENST00000316433 CTAGE3PQ8IX95 158 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MICU2Q8IYU8 434 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SCML4Q8N228 414 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CCDC185Q8N715 623 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 BHLHE22Q8NFJ8 381 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TEX47Q8TBZ9 253 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 ENKURQ8TC29 256 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 TFB1MQ8WVM0 346 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 CPT1BQ92523 772 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 DMRTB1Q96MA1 342 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KLF6Q99612 283 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 WDR83Q9BRX9 315 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 NAT9Q9BTE0 207 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KIFC1Q9BW19 673 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SLC13A1Q9BZW2 595 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 RSAD1Q9HA92 442 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 HPS4Q9NQG7 708 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KMT5AQ9NQR1 393 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 FBXO28Q9NVF7 368 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 DUS2Q9NX74 493 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PCDH10Q9P2E7 1040 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PFDN2Q9UHV9 154 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PACSIN3Q9UKS6 424 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PRPF19Q9UMS4 504 aaKnown RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 KLF2Q9Y5W3 355 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 MN1Q10571 1320 aaPredicted RBP6.67□□□□□ -1.34
ZNF540-201ENST00000316433 PTPRJQ12913 1337 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 SMCHD1A6NHR9 2005 aa6.67□□□□□ -1.34
ZNF540-201ENST00000316433 HACD1B0YJ81 288 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 SPATA31C2B4DYI2 1134 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 H3BMM5 538 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 BTN3A1O00481 513 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 NOP56O00567 594 aaKnown RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TOR1BO14657 336 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 RIMBP2O15034 1052 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 MDM4O15151 490 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 GREM1O60565 184 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 UPK1BO75841 260 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 SELLP14151 372 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 NPR3P17342 541 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 MAPK12P53778 367 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TAS2R40P59535 323 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 INCA1Q0VD86 236 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 FAAP100Q0VG06 881 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 BST1Q10588 318 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TUBB3Q13509 450 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ZMYND11Q15326 602 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 FAM214AQ32MH5 1076 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 XKR3Q5GH77 459 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 NOL9Q5SY16 702 aaKnown RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 C16orf46Q6P387 395 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 FRMD7Q6ZUT3 714 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 CAMK1DQ8IU85 385 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ST13P5Q8NFI4 369 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 IL17RDQ8NFM7 739 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 BPIFB6Q8NFQ5 453 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 DNERQ8NFT8 737 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TAS1R2Q8TE23 839 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ST8SIA2Q92186 375 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF516Q92618 1163 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 RNF170Q96K19 258 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 C11orf84Q9BUA3 381 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TRAF4Q9BUZ4 470 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TMEM168Q9H0V1 697 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 SEMA6AQ9H2E6 1030 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 NGRNQ9NPE2 291 aaKnown RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 BRD7Q9NPI1 651 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PXMP2Q9NR77 195 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ABCB10Q9NRK6 738 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 SMOXQ9NWM0 555 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 TRPC5Q9UL62 973 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PCDHA10Q9Y5I2 948 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PHGDHO43175 533 aaKnown RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 MED7O43513 233 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF780AO75290 641 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 IL18RAPO95256 599 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ECDO95905 644 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 C7P10643 843 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 XRCC1P18887 633 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 DDCP20711 480 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 EDNRBP24530 442 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PTX3P26022 381 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 HTR3AP46098 478 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 GCLMP48507 274 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PPP5CP53041 499 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 CACNB1Q02641 598 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 AQP6Q13520 282 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PEX6Q13608 980 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 GALEQ14376 348 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PAGE2BQ5JRK9 111 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 VARS2Q5ST30 1063 aaKnown RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 LBX2Q6XYB7 198 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 USP50Q70EL3 339 aaPredicted RBP6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ERMP1Q7Z2K6 904 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 SLC26A11Q86WA9 606 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 UNC5BQ8IZJ1 945 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 ZNF565Q8N9K5 539 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 FNDC5Q8NAU1 212 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 PSMA8Q8TAA3 256 aa6.66□□□□□ -1.34
ZNF540-201ENST00000316433 RDH11Q8TC12 318 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms