RNA–Protein interactions for RNA: ENST00000314915.6

BDNF-201, Transcript of brain derived neurotrophic factor, humanhuman

TSL 1 (best) BASIC

Gene BDNF, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-201ENST00000314915 ANKS1BQ7Z6G8 1248 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 SHKBP1Q8TBC3 707 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 C18orf25Q96B23 403 aaPredicted RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 NXNL1Q96CM4 212 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RTKNQ9BST9 563 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 COPS4Q9BT78 406 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 MYL10Q9BUA6 226 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 NECTIN3Q9NQS3 549 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RGS18Q9NS28 235 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RGS17Q9UGC6 210 aaPredicted RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 HCN2Q9UL51 889 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 FAM205CA6NFA0 338 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 PSTPIP1O43586 416 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 C7P10643 843 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 TNNI1P19237 187 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RIDAP52758 137 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 UBAP2LQ14157 1087 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 TUSC1Q2TAM9 212 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 SWSAP1Q6NVH7 229 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 C16orf46Q6P387 395 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZNF782Q6ZMW2 699 aaPredicted RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 AVL9Q8NBF6 648 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 IPMKQ8NFU5 416 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 OR2T34Q8NGX1 318 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 PPP1R36Q96LQ0 422 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 C7orf25Q9BPX7 421 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 SYNDIG1Q9H7V2 258 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZFP14Q9HCL3 533 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 CATSPERZQ9NTU4 200 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ACTR10Q9NZ32 417 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZSWIM5Q9P217 1185 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.34□□□□□ -0.91
BDNF-201ENST00000314915 A0A0G2JLW4 131 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 TERTO14746 1132 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 SYN3O14994 580 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RBBP9O75884 186 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 MYL3P08590 195 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 DHRS4L1P0CG22 281 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 APEHP13798 732 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 CSF2RAP15509 400 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 MSH3P20585 1137 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZP3P21754 424 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 SULT1E1P49888 294 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 UBE2IP63279 158 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 RTN1Q16799 776 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 KRBOX4Q5JUW0 171 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZNF517Q6ZMY9 492 aaPredicted RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 STRA8Q7Z7C7 330 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZNF527Q8NB42 609 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 TXNDC5Q8NBS9 432 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 C11orf65Q8NCR3 313 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 RIT1Q92963 219 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 MRPL48Q96GC5 212 aaKnown RBP9.34□□□□□ -0.91
BDNF-201ENST00000314915 ZYG11BQ9C0D3 744 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 DSN1Q9H410 356 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 MAGEF1Q9HAY2 307 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 BABAM1Q9NWV8 329 aa9.34□□□□□ -0.91
BDNF-201ENST00000314915 SGK1O00141 431 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 JUPP14923 745 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 SPNP16150 400 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 BGNP21810 368 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 SPAM1P38567 509 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ARPP19P56211 112 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ZNF45Q02386 682 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ZNF211Q13398 564 aaPredicted RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 KNOP1Q1ED39 458 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 ARMCX4Q5H9R4 360 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 MROH9Q5TGP6 573 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 USP45Q70EL2 814 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 GDPD3Q7L5L3 318 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 FAM71DQ8N9W8 422 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ZNF540Q8NDQ6 660 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 IL17REQ8NFR9 667 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 HEXDCQ8WVB3 486 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 CCM2Q9BSQ5 444 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 PAPOLGQ9BWT3 736 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 OR51M1Q9H341 326 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 FAM198AQ9UFP1 575 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 AFF4Q9UHB7 1163 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 PNMA8BQ9ULN7 279 aaPredicted RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 ASB4Q9Y574 426 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 DLG5Q8TDM6 1919 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ZFYVE16Q7Z3T8 1539 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 CROCCQ5TZA2 2017 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 H7C2Y5 167 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 TOR1BO14657 336 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 IPO13O94829 963 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 SORBS2O94875 1100 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 TOP3BO95985 862 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 CYP11A1P05108 521 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 CD63P08962 238 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 DARSP14868 501 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 OXTRP30559 389 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 EIF2S3P41091 472 aaKnown RBP9.33□□□□□ -0.92
BDNF-201ENST00000314915 GZMKP49863 264 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 ROR1Q01973 937 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 PDK2Q15119 407 aa9.33□□□□□ -0.92
BDNF-201ENST00000314915 BHLHB9Q6PI77 547 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms