RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 GPR161Q8N6U8 529 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 DNAAF3Q8N9W5 541 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 TMEM145Q8NBT3 493 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 BBOF1Q8ND07 529 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 MCUQ8NE86 351 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 BRSK1Q8TDC3 778 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 PIGKQ92643 395 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 DTD2Q96FN9 168 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 COQ10AQ96MF6 247 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 XAB2Q9HCS7 855 aaKnown RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 NCDNQ9UBB6 729 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 NFKBIL1Q9UBC1 381 aaPredicted RBP17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 PKP3Q9Y446 797 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 ZNF711Q9Y462 761 aa17.91■□□□□ 0.46
SSSCA1-201ENST00000309328 SLC31A1O15431 190 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 PAK4O96013 591 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 MLNP12872 115 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 ITIH2P19823 946 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 TEAD1P28347 426 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 MPLP40238 635 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 PTGIRP43119 386 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 PTSQ03393 145 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 DPTQ07507 201 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 TAF1AQ15573 450 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 TRIP13Q15645 432 aaPredicted RBP17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 CDKN3Q16667 212 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 NLRP9Q7RTR0 991 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 TMC3Q7Z5M5 1100 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 PPIL6Q8IXY8 311 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 DEFB119Q8N690 84 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 MFSD2AQ8NA29 543 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 C1orf216Q8TAB5 229 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 DTX3LQ8TDB6 740 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 BLOC1S5Q8TDH9 187 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 RUBCNQ92622 972 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 NUS1Q96E22 293 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 ORAI3Q9BRQ5 295 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 ZDHHC5Q9C0B5 715 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 RAB17Q9H0T7 212 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 MIR1-1HGQ9H1L0 117 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 FAM86C1Q9NVL1 165 aa17.9■□□□□ 0.46
SSSCA1-201ENST00000309328 A6NNZ2 444 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 CLDN7O95471 211 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 CD38P28907 300 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 CHRNA4P43681 627 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 RABIFP47224 123 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 SPINT3P49223 89 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 VPS41P49754 854 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 YPEL5P62699 121 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 MTM1Q13496 603 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 KCNJ11Q14654 390 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 LPAL2Q16609 132 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 DNTTIP2Q5QJE6 756 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 PDPK2PQ6A1A2 396 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 DENND5AQ6IQ26 1287 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 ESRP1Q6NXG1 681 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 IL27RAQ6UWB1 636 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 KYAT3Q6YP21 454 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 LYSMD3Q7Z3D4 306 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 TSPAN33Q86UF1 283 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 PTCD2Q8WV60 388 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 PEX13Q92968 403 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 CENPTQ96BT3 561 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 PLEKHG4BQ96PX9 1271 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 IL22Q9GZX6 179 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 TM9SF3Q9HD45 589 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 CASS4Q9NQ75 786 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 AASDHPPTQ9NRN7 309 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 BFARQ9NZS9 450 aa17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 UTP11Q9Y3A2 253 aaKnown RBP17.89■□□□□ 0.45
SSSCA1-201ENST00000309328 EML5Q05BV3 1969 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 DNALI1O14645 258 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 VILLO15195 856 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 TTI1O43156 1089 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 SYPP08247 313 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 TSHRP16473 764 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 LPOP22079 712 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 HADHAP40939 763 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 C2orf54Q08AI8 447 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 FGL2Q14314 439 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 SPARCL1Q14515 664 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 MORF4L2Q15014 288 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 GLE1Q53GS7 698 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 PLA2G2CQ5R387 149 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 FAM182AQ5T1J6 154 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 LRRC8BQ6P9F7 803 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 SLC23A3Q6PIS1 610 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 HSD11B1LQ7Z5J1 315 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 TECPR1Q7Z6L1 1165 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 ABI3BPQ7Z7G0 1075 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 PRUNE1Q86TP1 453 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 ZCCHC9Q8N567 271 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 TAB3Q8N5C8 712 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 TP53I13Q8NBR0 393 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 CPT1BQ92523 772 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 SNF8Q96H20 258 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 RANBP9Q96S59 729 aa17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 KLF6Q99612 283 aaPredicted RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 NUSAP1Q9BXS6 441 aaKnown RBP17.88■□□□□ 0.45
SSSCA1-201ENST00000309328 RIMKLBQ9ULI2 386 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 479.8 ms