RNA–Protein interactions for RNA: ENST00000309241.9

PPARGC1B-201, Transcript of PPARG coactivator 1 beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PPARGC1B, Length 10,568 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1B-201ENST00000309241 DUOX1Q9NRD9 1551 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PDPK1O15530 556 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RAMP2O60895 175 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TCEA3O75764 348 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TCEA1P23193 301 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CXCR2P25025 360 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MAP1SQ66K74 1059 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RFWD3Q6PCD5 774 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CACTIN-AS1Q8N1I8 211 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MTMR8Q96EF0 704 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 FAM84BQ96KN1 310 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MXRA8Q9BRK3 442 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 THUMPD1Q9NXG2 353 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LYVE1Q9Y5Y7 322 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SUPT7LO94864 414 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ADIGQ0VDE8 80 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ARSHQ5FYA8 562 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 FITM2Q8N6M3 262 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CD101Q93033 1021 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 C7orf26Q96N11 449 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PANX3Q96QZ0 392 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 AGXT2Q9BYV1 514 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SLC6A15Q9H2J7 730 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LEF1Q9UJU2 399 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ORC5O43913 435 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PRKD3O94806 890 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ADH1CP00326 375 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PTPN1P18031 435 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PITPNAQ00169 270 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SRSF11Q05519 484 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PARP8Q8N3A8 854 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CNTD1Q8N815 330 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ATG16L2Q8NAA4 619 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ALKBH4Q9NXW9 302 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SNX7Q9UNH6 387 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TLL1O43897 1013 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 VNN2O95498 520 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 DCKP27707 260 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ARF5P84085 180 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TPGS1Q6ZTW0 290 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LGI2Q8N0V4 545 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 BPIFB6Q8NFQ5 453 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MCFD2Q8NI22 146 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 IPCEF1Q8WWN9 437 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 ATG4AQ8WYN0 398 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PGLYRP2Q96PD5 576 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 DPY30Q9C005 99 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 NUDT5Q9UKK9 219 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 MTF2Q9Y483 593 aaPredicted RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 SPATA31D1Q6ZQQ2 1576 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LOXHD1Q8IVV2 1947 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 IQCMA0A1B0GVH7 501 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RGSL1A5PLK6 1076 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 H3BN98 237 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 KDM4BO94953 1096 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RORAP35398 523 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 RPL14P50914 215 aaKnown RBP8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 OR2B6P58173 313 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 IL18R1Q13478 541 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 GRIK4Q16099 956 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 LPCAT4Q643R3 524 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 TDRPQ86YL5 185 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PLEKHO2Q8TD55 490 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CREB3L1Q96BA8 519 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 CDRT15Q96T59 188 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 PSME2Q9UL46 239 aa8.34□□□□□ -1.07
PPARGC1B-201ENST00000309241 FGF10O15520 208 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 TSPAN1O60635 241 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 RBBP4Q09028 425 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 MFSD10Q14728 455 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 HERC3Q15034 1050 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PAGE2BQ5JRK9 111 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 TMEM214Q6NUQ4 689 aaKnown RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 NIPA1Q7RTP0 329 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 ERI1Q8IV48 349 aaKnown RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 ATP13A1Q9HD20 1204 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PCDHGB6Q9Y5F9 930 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 C1QTNF3-AMACRE9PGA6 284 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 CD97P48960 835 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 VPS26BQ4G0F5 336 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 ZC3H12AQ5D1E8 599 aaKnown RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 KLHL35Q6PF15 583 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 CLNKQ7Z7G1 428 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 RASAL3Q86YV0 1011 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 FBXO36Q8NEA4 188 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 SLC4A9Q96Q91 983 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 SLC9A7Q96T83 725 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 LRRC19Q9H756 370 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PAK6Q9NQU5 681 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 SGTAO43765 313 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 GLRBP48167 497 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PNLIPRP1P54315 467 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 AUHQ13825 339 aaKnown RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 FGD3Q5JSP0 725 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 C10orf62Q5T681 223 aaPredicted RBP8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PAGE2Q7Z2X7 111 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 TRPV3Q8NET8 790 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 OR52L1Q8NGH7 329 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 SEPHS2Q99611 448 aa8.33□□□□□ -1.08
PPARGC1B-201ENST00000309241 PCDHA3Q9Y5H8 950 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms