RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 VITQ6UXI7 678 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 CYP4V2Q6ZWL3 525 aaPredicted RBP4.96□□□□□ -1.61
CAST-201ENST00000309190 TRMT10CQ7L0Y3 403 aaKnown RBP4.96□□□□□ -1.61
CAST-201ENST00000309190 N4BP2L2Q92802 583 aaPredicted RBP4.96□□□□□ -1.61
CAST-201ENST00000309190 MAGEB18Q96M61 343 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 CENPOQ9BU64 300 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 MAF1Q9H063 256 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 SYBUQ9NX95 663 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 BACE2Q9Y5Z0 518 aa4.96□□□□□ -1.61
CAST-201ENST00000309190 PTPRDP23468 1912 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 FLNBO75369 2602 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 TLN1Q9Y490 2541 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 NLRC5Q86WI3 1866 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 C2orf72A6NCS6 295 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 H0Y858 1186 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 STX7O15400 261 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 CYP17A1P05093 508 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ACADMP11310 421 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ACADSP16219 412 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 CCND1P24385 295 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 THOC5Q13769 683 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 UAP1L1Q3KQV9 507 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ELMSAN1Q6PJG2 1045 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 RINLQ6ZS11 566 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ZCCHC23Q6ZST2 131 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 BHLHA9Q7RTU4 235 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 PRPF39Q86UA1 669 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 FAM20CQ8IXL6 584 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.96□□□□□ -1.62
CAST-201ENST00000309190 CRIPAKQ8N1N5 446 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ARFGAP2Q8N6H7 521 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SPDYE1Q8NFV5 336 aaPredicted RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 FAM174AQ8TBP5 190 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 PHOSPHO2Q8TCD6 241 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 TTC17Q96AE7 1141 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 HAPLN3Q96S86 360 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 BFARQ9NZS9 450 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SARDHQ9UL12 918 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 TLR6Q9Y2C9 796 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ERI2A8K979 691 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 APOC4-APOC2K7ER74 178 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 CASC3O15234 703 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 MID1O15344 667 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 AP1G1O43747 822 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SIN3BO75182 1162 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 APOC2P02655 101 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SERPIND1P05546 499 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SERPINF2P08697 491 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 MPSTP25325 297 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 PTPN3P26045 913 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 NMBRP28336 390 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 FMO4P31512 558 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 GARSP41250 739 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 BCL2L1Q07817 233 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 NIPAL4Q0D2K0 466 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ARHGEF7Q14155 803 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 OASLQ15646 514 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 GKAP1Q5VSY0 366 aaPredicted RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 TMEM215Q68D42 235 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 ZNF470Q6ECI4 717 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 TRABD2AQ86V40 505 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 LSRQ86X29 649 aaPredicted RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 EGFL6Q8IUX8 553 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 CACNA2D3Q8IZS8 1091 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 CCNYL1Q8N7R7 359 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 SNX31Q8N9S9 440 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 FBF1Q8TES7 1133 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 VCPIP1Q96JH7 1222 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 DNAJC1Q96KC8 554 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 RIPOR3Q96MK2 946 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 MKRN2Q9H000 416 aaKnown RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 SFXN1Q9H9B4 322 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 LMAN1LQ9HAT1 526 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 NPDC1Q9NQX5 325 aaPredicted RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.96□□□□□ -1.62
CAST-201ENST00000309190 ZFATQ9P243 1243 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 DCTN4Q9UJW0 460 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 FBXO10Q9UK96 956 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 CDH7Q9ULB5 785 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 RAI2Q9Y5P3 530 aa4.96□□□□□ -1.62
CAST-201ENST00000309190 PI15O43692 258 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 TTC4O95801 387 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 EGFP01133 1207 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 PCCBP05166 539 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 LINC00271P0C7V0 271 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SLC2A3P11169 496 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 HOXB2P14652 356 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 IL12RB1P42701 662 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ARCN1P48444 511 aaKnown RBP4.95□□□□□ -1.62
CAST-201ENST00000309190 PIK3CGP48736 1102 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 MPP1Q00013 466 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 ECT2LQ008S8 904 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 KBTBD12Q3ZCT8 623 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 C6orf118Q5T5N4 469 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 RETSATQ6NUM9 610 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SCIMPQ6UWF3 145 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 LYSMD3Q7Z3D4 306 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 SFTPA2Q8IWL1 248 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 BBS5Q8N3I7 341 aa4.95□□□□□ -1.62
CAST-201ENST00000309190 HDDC3Q8N4P3 179 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms