RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 MTA2O94776 668 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 HLA-DQB2P05538 268 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 GP1BAP07359 652 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 KRT10P13645 584 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 KELP23276 732 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 NOP2P46087 812 aaKnown RBP17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 KIAA1024LP59773 190 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 PNCKQ6P2M8 343 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 GKN2Q86XP6 184 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 NDUFAF2Q8N183 169 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 DCBLD1Q8N8Z6 715 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 TBATAQ96M53 351 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 TSGA13Q96PP4 275 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 LGMNQ99538 433 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 BOCQ9BWV1 1114 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 LGR4Q9BXB1 951 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 CYP4F12Q9HCS2 524 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 CD84Q9UIB8 345 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 CHKBQ9Y259 395 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 LAMA5O15230 3695 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 MYLKQ15746 1914 aa17.05■□□□□ 0.32
HMGCLL1-202ENST00000308161 CSO75390 466 aaKnown RBP17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 JCHAINP01591 159 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 COMTP21964 271 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 TGM2P21980 687 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 MAGEA1P43355 309 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 AP1B1Q10567 949 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 LLGL1Q15334 1064 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 PERM1Q5SV97 790 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 LRRC66Q68CR7 880 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 RAET1GQ6H3X3 334 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 NPNTQ6UXI9 565 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 Q6ZVL8 140 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 HEATR4Q86WZ0 1026 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 PLD5Q8N7P1 536 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 TC2NQ8N9U0 490 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 KYQ8NBH2 561 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 LPCAT1Q8NF37 534 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 TPCN2Q8NHX9 752 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 HNRNPLLQ8WVV9 542 aaKnown RBP17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 PIH1D2Q8WWB5 315 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 SPOCK2Q92563 424 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 HDAC11Q96DB2 347 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 DTD2Q96FN9 168 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 SCRN2Q96FV2 425 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 DEPDC7Q96QD5 511 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 CEP41Q9BYV8 373 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 SEPT10Q9P0V9 454 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 DKK4Q9UBT3 224 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 PADI4Q9UM07 663 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 GPR34Q9UPC5 381 aa17.04■□□□□ 0.32
HMGCLL1-202ENST00000308161 EME2A4GXA9 379 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 CA4P22748 312 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 NIPAL4Q0D2K0 466 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 IHHQ14623 411 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 RFLNAQ6ZTI6 216 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 B4GALNT4Q76KP1 1039 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 TAF8Q7Z7C8 310 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 RHOT1Q8IXI2 618 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 MCCC1Q96RQ3 725 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 TDRD1Q9BXT4 1180 aaKnown RBP17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 NRSN2Q9GZP1 204 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 GOLPH3Q9H4A6 298 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 PHPT1Q9NRX4 125 aaPredicted RBP17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 INTUQ9ULD6 942 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 TFR2Q9UP52 801 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 LHX6Q9UPM6 363 aa17.03■□□□□ 0.32
HMGCLL1-202ENST00000308161 A0A0J9YYE9 177 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 C3orf70A6NLC5 250 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 PDE2AO00408 941 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 CASC3O15234 703 aaKnown RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 BRINP1O60477 761 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 USP12O75317 370 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 TRBC1P01850 177 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 MYCLP1P12525 358 aaPredicted RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 TRIM23P36406 574 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 CD86P42081 329 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 SLC1A1P43005 524 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 PPIDQ08752 370 aaKnown RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 ZBTB17Q13105 803 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 SPA17Q15506 151 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 CDCP2Q5VXM1 449 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 DOK6Q6PKX4 331 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 ARL10Q8N8L6 244 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 FAM46DQ8NEK8 389 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 ARRDC2Q8TBH0 407 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 NAT6Q93015 286 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 RBM15Q96T37 977 aaKnown RBP eCLIP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 CCDC3Q9BQI4 270 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 TMEM168Q9H0V1 697 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 CARS2Q9HA77 564 aaKnown RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 PCDH9Q9HC56 1237 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 DDX56Q9NY93 547 aaKnown RBP17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 AMACRQ9UHK6 382 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 DGKBQ9Y6T7 804 aa17.02■□□□□ 0.32
HMGCLL1-202ENST00000308161 LRP4O75096 1905 aa17.02■□□□□ 0.31
HMGCLL1-202ENST00000308161 ASXL3Q9C0F0 2248 aa17.02■□□□□ 0.31
HMGCLL1-202ENST00000308161 PRSS38A1L453 326 aa17.01■□□□□ 0.31
HMGCLL1-202ENST00000308161 B4DGG1 531 aa17.01■□□□□ 0.31
HMGCLL1-202ENST00000308161 PSMD11O00231 422 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms