RNA–Protein interactions for RNA: ENST00000306256.13

RER1-201, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 5

Gene RER1, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-201ENST00000306256 ZNF843Q8N446 348 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 FBXO39Q8N4B4 442 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 OR6C4Q8NGE1 309 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 MGME1Q9BQP7 344 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 STRADBQ9C0K7 418 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 DPEP2Q9H4A9 486 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 PCDH18Q9HCL0 1135 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 WDR70Q9NW82 654 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 RNF215Q9Y6U7 377 aa20.53■□□□□ 0.88
RER1-201ENST00000306256 ATMQ13315 3056 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 ZNF462Q96JM2 2506 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 HEXIM1O94992 359 aaKnown RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 MYCLP1P12525 358 aaPredicted RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 LHCGRP22888 699 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 UGT1A5P35504 534 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 HSPA9P38646 679 aaKnown RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 MLLT3P42568 568 aaPredicted RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 RHDQ02161 417 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 ZSCAN23Q3MJ62 389 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 C14orf28Q4W4Y0 310 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 SPECC1LQ69YQ0 1117 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 OGFOD3Q6PK18 319 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 HSD11B1LQ7Z5J1 315 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 HEATR4Q86WZ0 1026 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 JAMLQ86YT9 394 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 SPOCK2Q92563 424 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 CCDC97Q96F63 343 aaPredicted RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 THAP2Q9H0W7 228 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 CARS2Q9HA77 564 aaKnown RBP20.52■□□□□ 0.88
RER1-201ENST00000306256 SSUH2Q9Y2M2 353 aa20.52■□□□□ 0.88
RER1-201ENST00000306256 GOLGA6CA6NDK9 693 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 GOLGA6BA6NDN3 693 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 NPIPB15A6NHN6 443 aaPredicted RBP20.51■□□□□ 0.87
RER1-201ENST00000306256 GOLGA6DP0CG33 693 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 GLB1P16278 677 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 SLC5A2P31639 672 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 ETV3P41162 512 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 MMP13P45452 471 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 SLC25A11Q02978 314 aaKnown RBP20.51■□□□□ 0.87
RER1-201ENST00000306256 CFHR1Q03591 330 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 PIGHQ14442 188 aaPredicted RBP20.51■□□□□ 0.87
RER1-201ENST00000306256 HLTFQ14527 1009 aaKnown RBP eCLIP20.51■□□□□ 0.87
RER1-201ENST00000306256 SPRED1Q7Z699 444 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 PTCD2Q8WV60 388 aaKnown RBP20.51■□□□□ 0.87
RER1-201ENST00000306256 DTD2Q96FN9 168 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 TMEM74Q96NL1 305 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 FUCA2Q9BTY2 467 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 PHPT1Q9NRX4 125 aaPredicted RBP20.51■□□□□ 0.87
RER1-201ENST00000306256 GOLGA6AQ9NYA3 693 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 PISDQ9UG56 409 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 ANAPC7Q9UJX3 599 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 APPL1Q9UKG1 709 aa20.51■□□□□ 0.87
RER1-201ENST00000306256 A0A0U1RQS6 177 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 ZIC2O95409 532 aaPredicted RBP20.5■□□□□ 0.87
RER1-201ENST00000306256 FUCA1P04066 466 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 CTPS1P17812 591 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 CCKBRP32239 447 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 MAZP56270 477 aaKnown RBP20.5■□□□□ 0.87
RER1-201ENST00000306256 MMRN1Q13201 1228 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 EIF3IQ13347 325 aaKnown RBP20.5■□□□□ 0.87
RER1-201ENST00000306256 KRT81Q14533 505 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 FIGNQ5HY92 759 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 KIAA1614Q5VZ46 1190 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 TSPAN33Q86UF1 283 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 BBS5Q8N3I7 341 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 NSMCE1Q8WV22 266 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 TEKT4Q8WW24 435 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 NUP85Q9BW27 656 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 NT5MQ9NPB1 228 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 SPATS2LQ9NUQ6 558 aaKnown RBP20.5■□□□□ 0.87
RER1-201ENST00000306256 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.5■□□□□ 0.87
RER1-201ENST00000306256 LRIT1Q9P2V4 623 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 PHTF1Q9UMS5 762 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 CFAP46Q8IYW2 2715 aa20.5■□□□□ 0.87
RER1-201ENST00000306256 A0A1W2PQ67 120 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 TMX2-CTNND1H3BSU7 103 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 PDE2AO00408 941 aaPredicted RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 PGLSO95336 258 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 CEACAM5P06731 702 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 CD48P09326 243 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 CYP2A6P11509 494 aaPredicted RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 SERPINB6P35237 376 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 SSR1P43307 286 aaKnown RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 GNPDA1P46926 289 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 CDH6P55285 790 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 ARHGEF7Q14155 803 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 TSR1Q2NL82 804 aaKnown RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 MARC1Q5VT66 337 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 RAET1GQ6H3X3 334 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 Q6ZVL8 140 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 TMPRSS9Q7Z410 1059 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 NIPA2Q8N8Q9 360 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 SNRNP27Q8WVK2 155 aaKnown RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 TTC9Q92623 222 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 SMIM14Q96QK8 99 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 TEX101Q9BY14 249 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 FRMD8Q9BZ67 464 aaPredicted RBP20.49■□□□□ 0.87
RER1-201ENST00000306256 SEMA4CQ9C0C4 833 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 IP6K2Q9UHH9 426 aa20.49■□□□□ 0.87
RER1-201ENST00000306256 LOXL2Q9Y4K0 774 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms