RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 TRIM71Q2Q1W2 868 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 ANKRD49Q8WVL7 239 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 CENPIQ92674 756 aaPredicted RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 DPEP3Q9H4B8 488 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 APOBEC3GQ9HC16 384 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 URADA6NGE7 173 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 M0R2N6 131 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 SYN3O14994 580 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 C22orf31O95567 290 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 NDST3O95803 873 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 IGFBP4P22692 258 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 L1CAMP32004 1257 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 IDH2P48735 452 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 COPZ1P61923 177 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 TTC27Q6P3X3 843 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 AMIGO3Q86WK7 504 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 CCDC185Q8N715 623 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 PCED1BQ96HM7 432 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 ITCHQ96J02 903 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 GCATO75600 419 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 PKMP14618 531 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 CHRNB2P17787 502 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 WARSP23381 471 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 EML3Q32P44 896 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 RASAL3Q86YV0 1011 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 OR4K2Q8NGD2 314 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 PANX1Q96RD7 426 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 HSD3B7Q9H2F3 369 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 SPEF2Q9C093 1822 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 C2CD4BA6NLJ0 364 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 RNASEH2BQ5TBB1 312 aaKnown RBP15.95■□□□□ 0.14
USP42-201ENST00000306177 TRIQKQ629K1 86 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 ADGRD1Q6QNK2 874 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 CAMKK1Q8N5S9 505 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 ASF1AQ9Y294 204 aa15.95■□□□□ 0.14
USP42-201ENST00000306177 SMIM31A0A1B0GVY4 71 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 ARL5CA6NH57 179 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SEPT4O43236 478 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SLC22A3O75751 556 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SPATA31D3P0C874 917 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TTKP33981 857 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TRAF3Q13114 568 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TIMM50Q3ZCQ8 353 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 PDZK1Q5T2W1 519 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 GPR158Q5T848 1215 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SPATA31D4Q6ZUB0 917 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 NEK10Q6ZWH5 1172 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 UBE2R2Q712K3 238 aaPredicted RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 CHPFQ8IZ52 775 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 OFCC1Q8IZS5 231 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 RTKNQ9BST9 563 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CHRAC1Q9NRG0 131 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 DDX18Q9NVP1 670 aaKnown RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 RAI2Q9Y5P3 530 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 GLYATL1P3A0A0U1RQE8 302 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 PNMA8CA0A1B0GUJ8 204 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 DYTNA2CJ06 578 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 BBIP1A8MTZ0 92 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CD48P09326 243 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 RSBN1Q5VWQ0 802 aaPredicted RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 SPESP1Q6UW49 350 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 RGL4Q8IZJ4 473 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 DAW1Q8N136 415 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CD99L2Q8TCZ2 262 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CLP1Q92989 425 aaKnown RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 GRIP2Q9C0E4 1043 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 PAIP1Q9H074 479 aaKnown RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 KLHL25Q9H0H3 589 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 KLHL1Q9NR64 748 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TBC1D14Q9P2M4 693 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 ZNF180Q9UJW8 692 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 HBS1LQ9Y450 684 aaKnown RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 FZD9O00144 591 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 IPO13O94829 963 aaKnown RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 ENO2P09104 434 aaPredicted RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 JAK1P23458 1154 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CXCR3P49682 368 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SLC10A6Q3KNW5 377 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 ANXA8L1Q5VT79 327 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 IRAK1BP1Q5VVH5 260 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 AAGABQ6PD74 315 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 REM2Q8IYK8 340 aaPredicted RBP15.94■□□□□ 0.14
USP42-201ENST00000306177 DGCR6LQ9BY27 220 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 FZD8Q9H461 694 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 NPEPPSL1A6NEC2 478 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 CENPXA8MT69 81 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 PRR5-ARHGAP8B1AHC4 643 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 NDUFS2O75306 463 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 FAM155BO75949 473 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 ARHGAP8P85298 464 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TAF5Q15542 800 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 TCEA2Q15560 299 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 OR52E6Q96RD3 313 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 HDHD2Q9H0R4 259 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 SOHLH2Q9NX45 425 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 ATP6V1HQ9UI12 483 aa15.94■□□□□ 0.14
USP42-201ENST00000306177 COL1A1P02452 1464 aaPredicted RBP15.93■□□□□ 0.14
USP42-201ENST00000306177 RFXANKO14593 260 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 SNAP91O60641 907 aa15.93■□□□□ 0.14
USP42-201ENST00000306177 LRIG2O94898 1065 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms