RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 PROSER1Q86XN7 944 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 TMTC1Q8IUR5 882 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 DTD2Q96FN9 168 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 BOCQ9BWV1 1114 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 CLPBQ9H078 707 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 BRD8Q9H0E9 1235 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 DKK4Q9UBT3 224 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 CLCA2Q9UQC9 943 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 DGKBQ9Y6T7 804 aa26.46■■□□□ 1.83
CDKN2A-201ENST00000304494 KCNK1O00180 336 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 TNFRSF10CO14798 259 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 YY2O15391 372 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 JCHAINP01591 159 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 MYF5P13349 255 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 RPL26P61254 145 aaKnown RBP26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 TFDP2Q14188 446 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 BZW1Q7L1Q6 419 aaKnown RBP26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 HSD11B1LQ7Z5J1 315 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 GKN2Q86XP6 184 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 IFI44Q8TCB0 444 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 ABCG4Q9H172 646 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 RPL26L1Q9UNX3 145 aaKnown RBP26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 CHKBQ9Y259 395 aa26.45■■□□□ 1.82
CDKN2A-201ENST00000304494 A0A0J9YYE9 177 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 TMEM202A6NGA9 273 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 SRRM3A6NNA2 597 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 KRT37O76014 449 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 NDUFA10O95299 355 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 TRBC1P01850 177 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 ZNF30P17039 623 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 FECHP22830 423 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 ETV3P41162 512 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 DYNLT1P63172 113 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 NIPAL4Q0D2K0 466 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 CDKN3Q16667 212 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 C11orf63Q6NUN7 778 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 MFSD7Q6UXD7 560 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 TSPAN33Q86UF1 283 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 DCBLD1Q8N8Z6 715 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 MDM1Q8TC05 714 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 PDXPQ96GD0 296 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 CALR3Q96L12 384 aaKnown RBP26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 OLFM3Q96PB7 478 aa26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 PHPT1Q9NRX4 125 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 SBDSQ9Y3A5 250 aaKnown RBP eCLIP26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 EPN1Q9Y6I3 576 aaPredicted RBP26.44■■□□□ 1.82
CDKN2A-201ENST00000304494 IGF2RP11717 2491 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 EME2A4GXA9 379 aaPredicted RBP26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 CAPN8A6NHC0 703 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 OPA1O60313 960 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 MYCLP1P12525 358 aaPredicted RBP26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 CDKN2BP42772 138 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 NR2C2P49116 596 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 LRRC66Q68CR7 880 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 NPNTQ6UXI9 565 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 Q6ZVL8 140 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 NXPE2Q96DL1 559 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 RBM15Q96T37 977 aaKnown RBP eCLIP26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 PCDH9Q9HC56 1237 aa26.43■■□□□ 1.82
CDKN2A-201ENST00000304494 CPED1A4D0V7 1026 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 SOWAHDA6NJG2 315 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 MT-CO3P00414 261 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 TEAD1P28347 426 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 DPTQ07507 201 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 ZBTB17Q13105 803 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 IHHQ14623 411 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 PTPRRQ15256 657 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 TAZQ16635 292 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 GUSBP11Q6P575 273 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 CRTC1Q6UUV9 634 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 SPOCD1Q6ZMY3 1216 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 GAS2L3Q86XJ1 694 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 KATNAL2Q8IYT4 538 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 PELI3Q8N2H9 469 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 MAPK15Q8TD08 544 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 OR1E3Q8WZA6 343 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 NAT6Q93015 286 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 LGR4Q9BXB1 951 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 TEX101Q9BY14 249 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 FGF22Q9HCT0 170 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 TFR2Q9UP52 801 aa26.42■■□□□ 1.82
CDKN2A-201ENST00000304494 GOLGA6CA6NDK9 693 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 GOLGA6BA6NDN3 693 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 CELA2BP08218 269 aaPredicted RBP26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 GOLGA6DP0CG33 693 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 CD86P42081 329 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 CYP4F3Q08477 520 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 RAET1GQ6H3X3 334 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 EFL1Q7Z2Z2 1120 aaKnown RBP26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 TECPR1Q7Z6L1 1165 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 DAAM2Q86T65 1068 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 HEATR4Q86WZ0 1026 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 SLC35F3Q8IY50 421 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 RAVER1Q8IY67 606 aaKnown RBP26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 CNTD1Q8N815 330 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 ARL10Q8N8L6 244 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 LPCAT1Q8NF37 534 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 ADGRE3Q9BY15 652 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 NRSN2Q9GZP1 204 aa26.41■■□□□ 1.82
CDKN2A-201ENST00000304494 GOLPH3Q9H4A6 298 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms