RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 ECHDC2Q86YB7 292 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PLD5Q8N7P1 536 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 RNF208Q9H0X6 261 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CHURC1-FNTBB4DL54 471 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 TGDSO95455 350 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 SNHG28P0DPA3 235 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CYP4B1P13584 511 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 UQCRBP14927 111 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PSMD5Q16401 504 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 ZBTB46Q86UZ6 589 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 KBTBD8Q8NFY9 601 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PSMA8Q8TAA3 256 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 WDR60Q8WVS4 1066 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 SLC38A2Q96QD8 506 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 TRMOQ9BU70 441 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 SLC39A8Q9C0K1 460 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 AGO3Q9H9G7 860 aaKnown RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 TRIM17Q9Y577 477 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 TIPRLO75663 272 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 MTAPQ13126 283 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CFAP52Q8N1V2 620 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 LRRC57Q8N9N7 239 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 NDRG1Q92597 394 aaKnown RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 RSPH9Q9H1X1 276 aaPredicted RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 C12orf65Q9H3J6 166 aaKnown RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CORO1CQ9ULV4 474 aaPredicted RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 AK5Q9Y6K8 562 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 BBIP1A8MTZ0 92 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 OR10H3O60404 316 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 XIAPP98170 497 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 NDUFAF6Q330K2 333 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 HSDL1Q3SXM5 330 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PPTC7Q8NI37 304 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 TNFRSF21O75509 655 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CES1P23141 567 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 ZNHIT3Q15649 155 aaPredicted RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 METTL3Q86U44 580 aaKnown RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 RASAL3Q86YV0 1011 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 HPS6Q86YV9 775 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 COPS8Q99627 209 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 GPR20Q99678 358 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 FTHL17Q9BXU8 183 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 NOL11Q9H8H0 719 aaKnown RBP13.95□□□□□ -0.18
PRKCB-201ENST00000303531 S100A14Q9HCY8 104 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 A0A1W2PQH9 124 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 AHCYL1O43865 530 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PPP1R15BQ5SWA1 713 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 HECTD2Q5U5R9 776 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 BHLHB9Q6PI77 547 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 FLCNQ8NFG4 579 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 CLPTM1LQ96KA5 538 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 PLGRKTQ9HBL7 147 aa13.95□□□□□ -0.18
PRKCB-201ENST00000303531 UGT2B15P54855 530 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 TARBP2Q15633 366 aaKnown RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 SLC5A9Q2M3M2 681 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 POC5Q8NA72 575 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 RBM15BQ8NDT2 890 aaKnown RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 OR6K2Q8NGY2 324 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 SPOCK2Q92563 424 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 TSPAN18Q96SJ8 248 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 SMIM11AP58511 58 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 RHBDF2Q6PJF5 856 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 SERPINA13PQ6UXR4 307 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 HOPXQ9BPY8 73 aaPredicted RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 CRISPLD1Q9H336 500 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 MAGEL2Q9UJ55 1249 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 G3V2T6 193 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 PRG2P13727 222 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 CTSEP14091 401 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 MOB2Q70IA6 237 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 KLHL31Q9H511 634 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 GPSM3Q9Y4H4 160 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 KCNE2Q9Y6J6 123 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 KLHL18O94889 574 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 FAM47BQ8NA70 645 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 CHRAC1Q9NRG0 131 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 RCOR3Q9P2K3 495 aaPredicted RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 PSMD13Q9UNM6 376 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 PPM1JQ5JR12 505 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 RNASEH2BQ5TBB1 312 aaKnown RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 NKD2Q969F2 451 aaPredicted RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 PTGFRNQ9P2B2 879 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 IPO13O94829 963 aaKnown RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 NRG1Q02297 640 aaPredicted RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 ADGRD1Q6QNK2 874 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 R3HCC1LQ7Z5L2 792 aaKnown RBP13.94□□□□□ -0.18
PRKCB-201ENST00000303531 OR4A15Q8NGL6 344 aa13.94□□□□□ -0.18
PRKCB-201ENST00000303531 SUV39H1O43463 412 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 IL1BP01584 269 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 IFNA16P05015 189 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 TRIM40Q6P9F5 258 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 OR2T12Q8NG77 320 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 QKIQ96PU8 341 aaKnown RBP eCLIP13.93□□□□□ -0.185e-7■■■■■ 44.9
PRKCB-201ENST00000303531 MRPS7Q9Y2R9 242 aaKnown RBP13.93□□□□□ -0.18
PRKCB-201ENST00000303531 CCL23P55773 120 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 PMF1Q6P1K2 205 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 C1QTNF3-AMACRE9PGA6 284 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 RALGDSQ12967 914 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 RFX4Q33E94 735 aa13.93□□□□□ -0.18
PRKCB-201ENST00000303531 ANKRD22Q5VYY1 191 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms