RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 PGBD3Q8N328 593 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 GPR26Q8NDV2 337 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 OR14C36Q8NHC7 312 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 MFSD3Q96ES6 412 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 TOE1Q96GM8 510 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 KLF6Q99612 283 aaPredicted RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 EBNA1BP2Q99848 306 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 WRAP53Q9BUR4 548 aaKnown RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 C1QTNF2Q9BXJ5 285 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 FRMD8Q9BZ67 464 aaPredicted RBP9.49□□□□□ -0.89
RFX3-201ENST00000302303 FOXP3Q9BZS1 431 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 PHACTR1Q9C0D0 580 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 IL22Q9GZX6 179 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 EPB41L4BQ9H329 900 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 KDM4CQ9H3R0 1056 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 TRABDQ9H4I3 376 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 ZFYVE1Q9HBF4 777 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.49□□□□□ -0.89
RFX3-201ENST00000302303 SOX13Q9UN79 622 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 CYP8B1Q9UNU6 501 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 INVSQ9Y283 1065 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 COQ6Q9Y2Z9 468 aa9.49□□□□□ -0.89
RFX3-201ENST00000302303 DOCK9Q9BZ29 2069 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 SCN8AQ9UQD0 1980 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 C1orf232A0A0U1RR37 186 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 IGLON5A6NGN9 336 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 PRR33A8MZF0 331 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 H0Y858 1186 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 AP3B1O00203 1094 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 CCL22O00626 93 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 AXIN1O15169 862 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 EIF3HO15372 352 aaKnown RBP eCLIP9.48□□□□□ -0.89
RFX3-201ENST00000302303 LAMTOR5O43504 91 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 LATO43561 262 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 TSPAN6O43657 245 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 ALDH1A2O94788 518 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 IGHV4-34P06331 123 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 ACADMP11310 421 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 C6P13671 934 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 ZNF30P17039 623 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 BPIP17213 487 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 SPINT3P49223 89 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 FNTBP49356 437 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 ARL4CP56559 192 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 SARNPP82979 210 aaKnown RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 PEX6Q13608 980 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 BBS9Q3SYG4 887 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 TTC31Q49AM3 519 aaPredicted RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 CFAP58Q5T655 872 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 TSTD2Q5T7W7 516 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 STEAP4Q687X5 459 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 CCDC70Q6NSX1 233 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 KDM7AQ6ZMT4 941 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 WDR5BQ86VZ2 330 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 UNC5BQ8IZJ1 945 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 PDIK1LQ8N165 341 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 PNPLA1Q8N8W4 532 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 OR4K2Q8NGD2 314 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 AENQ8WTP8 325 aaKnown RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 LRRC39Q96DD0 335 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 DNAJC1Q96KC8 554 aaKnown RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 FMO2Q99518 471 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 C19orf43Q9BQ61 176 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 BTBD1Q9H0C5 482 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 SEMA4AQ9H3S1 761 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 C6orf106Q9H6K1 298 aaPredicted RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 SGK2Q9HBY8 427 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 MRM3Q9HC36 420 aaKnown RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 LRRC4CQ9HCJ2 640 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 BPIFA1Q9NP55 256 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 DYRK4Q9NR20 520 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 NLE1Q9NVX2 485 aaPredicted RBP9.48□□□□□ -0.89
RFX3-201ENST00000302303 BFARQ9NZS9 450 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 HACD3Q9P035 362 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 BCCIPQ9P287 314 aaKnown RBP eCLIP9.48□□□□□ -0.89
RFX3-201ENST00000302303 FBXO4Q9UKT5 387 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 TMPRSS11EQ9UL52 423 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 RIMKLBQ9ULI2 386 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 SLCO1B1Q9Y6L6 691 aa9.48□□□□□ -0.89
RFX3-201ENST00000302303 PLXND1Q9Y4D7 1925 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 FAM237BA0A1B0GVD1 139 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 A0A1W2PQU0 124 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 CCDC78A2IDD5 438 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 HEATR9A2RTY3 570 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 AGAP14A8MT82 685 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 H7C0S8 307 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 NDC80O14777 642 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 WNT9AO14904 365 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 RAD51BO15315 384 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 HRO43593 1189 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ZNF217O75362 1048 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 RECQL5O94762 991 aaPredicted RBP9.47□□□□□ -0.89
RFX3-201ENST00000302303 SOD1P00441 154 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 LPOP22079 712 aaPredicted RBP9.47□□□□□ -0.89
RFX3-201ENST00000302303 CD6P30203 668 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 ETV3P41162 512 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 MAGEA4P43358 317 aa9.47□□□□□ -0.89
RFX3-201ENST00000302303 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms