RNA–Protein interactions for RNA: ENST00000300648.6

GCN1-201, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GCN1, Length 8,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-201ENST00000300648 CDH19Q9H159 772 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FADS2P1A8MWK0 482 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 SHOX2O60902 331 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 MICAL2O94851 1124 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 STOMP27105 288 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 INO80EQ8NBZ0 244 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 IPCEF1Q8WWN9 437 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 THRSPQ92748 146 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 PANX1Q96RD7 426 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FAM129BQ96TA1 746 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 EBNA1BP2Q99848 306 aaKnown RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 TRNAU1APQ9NX07 287 aaKnown RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 M0QX08 132 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ENTPD5O75356 428 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 KRT36O76013 467 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FESP07332 822 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 MIPP30301 263 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 CCR4P51679 360 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 E2F2Q14209 437 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ACAP2Q15057 778 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 LIN52Q52LA3 116 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ZNF697Q5TEC3 545 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 SYCE2Q6PIF2 218 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 SLC9A9Q8IVB4 645 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FAM47BQ8NA70 645 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 MKL1Q969V6 931 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 PHF12Q96QT6 1004 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 DEFB129Q9H1M3 183 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 MYPNQ86TC9 1320 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 WRBO00258 174 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ITGA2BP08514 1039 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ATCAYQ86WG3 371 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 BEND7Q8N7W2 519 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 TIFAQ96CG3 184 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 C11orf24Q96F05 449 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 ALG9Q9H6U8 611 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 C12orf4Q9NQ89 552 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ZMYM5Q9UJ78 669 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 TMEM131LA2VDJ0 1609 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 FAM237AA0A1B0GTK4 181 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 RFXANKO14593 260 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 PTPN1P18031 435 aaKnown RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 KCNJ2P63252 427 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 BST1Q10588 318 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 SCARF1Q14162 830 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 RBFAQ8N0V3 343 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 RERGQ96A58 199 aaPredicted RBP11.31□□□□□ -0.6
GCN1-201ENST00000300648 TUBGCP5Q96RT8 1024 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 RHOJQ9H4E5 214 aa11.31□□□□□ -0.6
GCN1-201ENST00000300648 ACKR2O00590 384 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 LTFP02788 710 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 RPL4P36578 427 aaKnown RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 NAGLUP54802 743 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 MAMLD1Q13495 774 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 HERC3Q15034 1050 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 BBS12Q6ZW61 710 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 OR2T12Q8NG77 320 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 NCKAP1Q9Y2A7 1128 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 TLL2Q9Y6L7 1015 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 NRP2O60462 931 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 HGFP14210 728 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 PLEKHH3Q7Z736 793 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 SLC35C1Q96A29 364 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 OR52E6Q96RD3 313 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 C3orf14Q9HBI5 128 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 KLQ9UEF7 1012 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 MCIDASD6RGH6 385 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 CTSHP09668 335 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 KCNA10Q16322 511 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 FAM71AQ8IYT1 594 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 DNAJA4Q8WW22 397 aaPredicted RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 RIIAD1A6NNX1 92 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 EDF1O60869 148 aaKnown RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 S100A2P29034 98 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 CTSKP43235 329 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 ACOX1Q15067 660 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 MSANTD1Q6ZTZ1 278 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 PACRGLQ8N7B6 248 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 LRRC20Q8TCA0 184 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 THUMPD1Q9NXG2 353 aaKnown RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 RABL2AQ9UBK7 228 aaPredicted RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 RABL2BQ9UNT1 228 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 ZNF510Q9Y2H8 683 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 TELO2Q9Y4R8 837 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 MANSC4A6NHS7 340 aaPredicted RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 PITPNM1O00562 1244 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 ASLP04424 464 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 GLRA2P23416 452 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 CLCN2P51788 898 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 WDR59Q6PJI9 974 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 FRMD7Q6ZUT3 714 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 FAM163AQ96GL9 167 aaPredicted RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 ERCC6L2Q5T890 1561 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 FAM237BA0A1B0GVD1 139 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 RSL1D1O76021 490 aaKnown RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 FGBP02675 491 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 PGRP06401 933 aa11.3□□□□□ -0.6
GCN1-201ENST00000300648 GLB1L3Q8NCI6 653 aaPredicted RBP11.3□□□□□ -0.6
GCN1-201ENST00000300648 DIRAS2Q96HU8 199 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms