RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 CXADRP78310 365 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 KRT81Q14533 505 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 OGFOD3Q6PK18 319 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 TSPAN33Q86UF1 283 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 TEX26Q8N6G2 289 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 PTCD2Q8WV60 388 aaKnown RBP25.25■■□□□ 1.63
U2AF1-201ENST00000291552 KCNE4Q8WWG9 221 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 DTD2Q96FN9 168 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 SMIM14Q96QK8 99 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 CYP4F12Q9HCS2 524 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 IFNKQ9P0W0 207 aa25.25■■□□□ 1.63
U2AF1-201ENST00000291552 RCOR3Q9P2K3 495 aaPredicted RBP25.25■■□□□ 1.63
U2AF1-201ENST00000291552 CCDC187A0A096LP49 1063 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 A0A1W2PQ67 120 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 PRSS38A1L453 326 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 ATXN7O15265 892 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 FUCA1P04066 466 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 PRB1P04280 392 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 RPLP0P05388 317 aaKnown RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 MYCLP1P12525 358 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 KELP23276 732 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 DPYSL3Q14195 570 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 RALGPS1Q5JS13 557 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 CCDC122Q5T0U0 273 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 CERCAMQ5T4B2 595 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 MARC1Q5VT66 337 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 DENND2CQ68D51 928 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 NCBP2-AS2Q69YL0 99 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 PCSK4Q6UW60 755 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 GPR155Q7Z3F1 870 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 TAF8Q7Z7C8 310 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 HEATR4Q86WZ0 1026 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 WDR36Q8NI36 951 aaKnown RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 ZNF564Q8TBZ8 553 aaPredicted RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 IQCDQ96DY2 449 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 GFM1Q96RP9 751 aaKnown RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 NT5MQ9NPB1 228 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 PHTF1Q9UMS5 762 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 SSUH2Q9Y2M2 353 aa25.24■■□□□ 1.63
U2AF1-201ENST00000291552 LUC7L2Q9Y383 392 aaKnown RBP25.24■■□□□ 1.63
U2AF1-201ENST00000291552 B4DGG1 531 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 MYO1FO00160 1098 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 C1QL1O75973 258 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 PDHA1P08559 390 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 RBMS1P29558 406 aaKnown RBP25.23■■□□□ 1.63
U2AF1-201ENST00000291552 GJC1P36383 396 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 GALNT2Q10471 571 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 NFKBIBQ15653 356 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 FOXR1Q6PIV2 292 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 RFLNAQ6ZTI6 216 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 CLEC14AQ86T13 490 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 BBS5Q8N3I7 341 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 FAM46DQ8NEK8 389 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 PIH1D2Q8WWB5 315 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 LIN37Q96GY3 246 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-201ENST00000291552 TEX101Q9BY14 249 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 FRMD8Q9BZ67 464 aaPredicted RBP25.23■■□□□ 1.63
U2AF1-201ENST00000291552 FOXP3Q9BZS1 431 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 CPNE5Q9HCH3 593 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 PPIL1Q9Y3C6 166 aa25.23■■□□□ 1.63
U2AF1-201ENST00000291552 FZD6O60353 706 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 MAP3K6O95382 1288 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 CEACAM5P06731 702 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 CTPS1P17812 591 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 CASP14P31944 242 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 TAS2R40P59535 323 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 HLTFQ14527 1009 aaKnown RBP eCLIP25.22■■□□□ 1.63
U2AF1-201ENST00000291552 PAFAH1B3Q15102 231 aaKnown RBP25.22■■□□□ 1.63
U2AF1-201ENST00000291552 SPECC1LQ69YQ0 1117 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 Q6ZVL8 140 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 NRROSQ86YC3 692 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 CCNJLQ8IV13 435 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 MAML1Q92585 1016 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 SCRN2Q96FV2 425 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 SEMA3CQ99985 751 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 PACSIN1Q9BY11 444 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 LRRN3Q9H3W5 708 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 RNF215Q9Y6U7 377 aa25.22■■□□□ 1.63
U2AF1-201ENST00000291552 TEX51A0A1B0GUA7 166 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 PSMD11O00231 422 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 KLK10O43240 276 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 SOD1P00441 154 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 CYP2A6P11509 494 aaPredicted RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 HNRNPH3P31942 346 aaKnown RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 GARSP41250 739 aaKnown RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 SSR1P43307 286 aaKnown RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 C14orf28Q4W4Y0 310 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 ARMC12Q5T9G4 340 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 ALG1LQ6GMV1 187 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 TECPR1Q7Z6L1 1165 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 OR6C4Q8NGE1 309 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 LRRN4Q8WUT4 740 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 NSMCE1Q8WV22 266 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 SLC39A7Q92504 469 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 CARS2Q9HA77 564 aaKnown RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 EPB41L5Q9HCM4 733 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 PHPT1Q9NRX4 125 aaPredicted RBP25.21■■□□□ 1.63
U2AF1-201ENST00000291552 MOSPD1Q9UJG1 213 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 APPL1Q9UKG1 709 aa25.21■■□□□ 1.63
U2AF1-201ENST00000291552 ST14Q9Y5Y6 855 aa25.21■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms