RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 ADRA1AP35348 466 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 IGFALSP35858 605 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 RABIFP47224 123 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 ACOX1Q15067 660 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 IRF4Q15306 451 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 SLC1A5Q15758 541 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 CYP1B1Q16678 543 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 ZNF423Q2M1K9 1284 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 HSD11B1LQ7Z5J1 315 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 IPMKQ8NFU5 416 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 NETO1Q8TDF5 533 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 ERVMER34-1Q9H9K5 563 aa26.92■■□□□ 1.9
SSU72-201ENST00000291386 KNL1Q8NG31 2342 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 TMEM131Q92545 1883 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 GOLGA6CA6NDK9 693 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 GOLGA6BA6NDN3 693 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 DFNA5O60443 496 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 CER1O95813 267 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 GOLGA6DP0CG33 693 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 TNNT3P45378 269 aaPredicted RBP26.91■■□□□ 1.9
SSU72-201ENST00000291386 STC1P52823 247 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 ATXN3P54252 364 aaPredicted RBP26.91■■□□□ 1.9
SSU72-201ENST00000291386 YPEL5P62699 121 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 HLA-BQ31612 363 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 KCTD11Q693B1 232 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 RANBP10Q6VN20 620 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 Q6ZSR6 202 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 NLRP8Q86W28 1048 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 SPATS2Q86XZ4 545 aaKnown RBP26.91■■□□□ 1.9
SSU72-201ENST00000291386 MINDY1Q8N5J2 469 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 OR13H1Q8NG92 308 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 DTD2Q96FN9 168 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 GTPBP2Q9BX10 602 aaKnown RBP26.91■■□□□ 1.9
SSU72-201ENST00000291386 FSD1LQ9BXM9 530 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 GDF3Q9NR23 364 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 DNAAF2Q9NVR5 837 aaKnown RBP26.91■■□□□ 1.9
SSU72-201ENST00000291386 GOLGA6AQ9NYA3 693 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 SAR1BQ9Y6B6 198 aa26.91■■□□□ 1.9
SSU72-201ENST00000291386 ZNF185O15231 689 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 FANCGO15287 622 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 CLDN7O95471 211 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 FGF1P05230 155 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 C1SP09871 688 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 ACTN2P35609 894 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 MTM1Q13496 603 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 SIRPB2Q5JXA9 342 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 ESRP1Q6NXG1 681 aaKnown RBP26.9■■□□□ 1.9
SSU72-201ENST00000291386 NUS1Q96E22 293 aa26.9■■□□□ 1.9
SSU72-201ENST00000291386 A0A0U1RQS6 177 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 C1orf232A0A0U1RR37 186 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 LOC105378220A0A1B0GUY1 285 aaPredicted RBP26.89■■□□□ 1.9
SSU72-201ENST00000291386 RGSL1A5PLK6 1076 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 PSMD3O43242 534 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 IFNB1P01574 187 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ZNF883P0CG24 379 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ETV3P41162 512 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ETF1P62495 437 aaKnown RBP26.89■■□□□ 1.9
SSU72-201ENST00000291386 DPTQ07507 201 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 STPG1Q5TH74 334 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 Q6ZVL8 140 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ZNF765Q7L2R6 523 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 TMC3Q7Z5M5 1100 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 NRSN1Q8IZ57 195 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 SLC22A18ASQ8N1D0 253 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 OXR1Q8N573 874 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 CCDC89Q8N998 374 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ATL2Q8NHH9 583 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 GAREM1Q9H706 876 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 ZFYVE1Q9HBF4 777 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 PAK5Q9P286 719 aa26.89■■□□□ 1.9
SSU72-201ENST00000291386 AGTP01019 485 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 TEAD1P28347 426 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 FDFT1P37268 417 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 KCNJ1P48048 391 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 DENND2CQ68D51 928 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 C4orf22Q6V702 233 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 PTAR1Q7Z6K3 402 aaPredicted RBP26.88■■□□□ 1.89
SSU72-201ENST00000291386 CCHCR1Q8TD31 782 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 LRRC45Q96CN5 670 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 ELF4Q99607 663 aaPredicted RBP26.88■■□□□ 1.89
SSU72-201ENST00000291386 FICDQ9BVA6 458 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 AP1M1Q9BXS5 423 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 TRABDQ9H4I3 376 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 ARNT2Q9HBZ2 717 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 SMARCAL1Q9NZC9 954 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 HACD3Q9P035 362 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 ZNF711Q9Y462 761 aa26.88■■□□□ 1.89
SSU72-201ENST00000291386 ERI2A8K979 691 aaKnown RBP26.87■■□□□ 1.89
SSU72-201ENST00000291386 SDHBP21912 280 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 TRIM23P36406 574 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 CHRNA4P43681 627 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 RXRGP48443 463 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 PNCKQ6P2M8 343 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 LYSMD3Q7Z3D4 306 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 CREG2Q8IUH2 290 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 GLIS1Q8NBF1 620 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 MAGOHBQ96A72 148 aaKnown RBP26.87■■□□□ 1.89
SSU72-201ENST00000291386 EID2BQ96D98 161 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 TBL1YQ9BQ87 522 aa26.87■■□□□ 1.89
SSU72-201ENST00000291386 LRRC40Q9H9A6 602 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms