RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 HEATR9A2RTY3 570 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EBAG9O00559 213 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NARSO43776 548 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SNX2O60749 519 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EGFP01133 1207 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NUDT17P0C025 328 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ITGB7P26010 798 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CCNHP51946 323 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PTPN5P54829 565 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TRAF2Q12933 501 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PON2Q15165 354 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FAXCQ5TGI0 409 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM46CQ5VWP2 391 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ZDHHC20Q5W0Z9 365 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 GDPD4Q6W3E5 623 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CROCCP2Q86T23 111 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 LZICQ8WZA0 190 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EZH1Q92800 747 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SIGLEC10Q96LC7 697 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 RAB3IPQ96QF0 476 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EBNA1BP2Q99848 306 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 RSPH9Q9H1X1 276 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SUV39H2Q9H5I1 410 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 HCN2Q9UL51 889 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM95CA0A1B0GW59 222 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 KPNA3O00505 521 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TRIM24O15164 1050 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ALDH1A2O94788 518 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 MT-CYBP00156 380 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ASGR2P07307 311 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NTSR1P30989 418 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 MAGEA4P43358 317 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 DHX9Q08211 1270 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PDIA2Q13087 525 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TAF1AQ15573 450 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TPRG1Q6ZUI0 275 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PABPC3Q9H361 631 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ARHGEF3Q9NR81 526 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 STON1Q9Y6Q2 735 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PLXNA2O75051 1894 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CAPN8A6NHC0 703 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 C1QTNF3-AMACRE9PGA6 284 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SLC7A4O43246 635 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TCEA3O75764 348 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CIB2O75838 187 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PRLP01236 227 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 BMP1P13497 986 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ADRA1DP25100 572 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 IL12RB1P42701 662 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SOX9P48436 509 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ACVR1Q04771 509 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CCDC15Q0P6D6 951 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NAA30Q147X3 362 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF805Q5CZA5 627 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ATXN7L2Q5T6C5 722 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EGFLAMQ63HQ2 1017 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 KCTD16Q68DU8 428 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 GALNT7Q86SF2 657 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 LCA5Q86VQ0 697 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SLC25A41Q8N5S1 370 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 AGR3Q8TD06 166 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 RAB7BQ96AH8 199 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 STAMBPL1Q96FJ0 436 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SAYSD1Q9NPB0 183 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PPM1HQ9ULR3 514 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TCAF1Q9Y4C2 921 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 MROH6A6NGR9 719 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CRTAMO95727 393 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM153BP0C7A2 387 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CYP2A6P11509 494 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 EIF3BP55884 814 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 IHHQ14623 411 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FAM153CQ494X1 144 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 FBXO38Q6PIJ6 1188 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 SERPINA13PQ6UXR4 307 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 DPY19L3Q6ZPD9 716 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 Q6ZVU0 165 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 LMNTD2Q8IXW0 634 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 ST13P5Q8NFI4 369 aaPredicted RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 OR52K1Q8NGK4 314 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 OR2T3Q8NH03 318 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 BRSK1Q8TDC3 778 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 PIH1D2Q8WWB5 315 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 RPL10LQ96L21 214 aaKnown RBP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 TNKS2Q9H2K2 1166 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 CD248Q9HCU0 757 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NINJ2Q9NZG7 142 aa8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.45□□□□□ -1.06
PTPDC1-201ENST00000288976 NUP205Q92621 2012 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 A0A0J9YYE9 177 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 RGSL1A5PLK6 1076 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PSMD11O00231 422 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 RIPK2O43353 540 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ACSL3O95573 720 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 AGTP01019 485 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 TRBC1P01850 177 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 ZNF30P17039 623 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 PRKCHP24723 683 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 STX1BP61266 288 aa8.44□□□□□ -1.06
PTPDC1-201ENST00000288976 CAPRIN1Q14444 709 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms