RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 TNNT1P13805 278 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 HNF1BP35680 557 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RWDD2BP57060 319 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RPL26P61254 145 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 ELP6Q0PNE2 266 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF235Q14590 738 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 TEAD4Q15561 434 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 CNGA3Q16281 694 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 N4BP2L1Q5TBK1 243 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 MEI1Q5TIA1 1274 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 KCTD16Q68DU8 428 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 CRTC1Q6UUV9 634 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 KDELC1Q6UW63 502 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 LIAT1Q6ZQX7 453 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RFLNAQ6ZTI6 216 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 DGLUCYQ7Z3D6 616 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RFX6Q8HWS3 928 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 DCP2Q8IU60 420 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 REXO1L1PQ8IX06 675 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RAVER1Q8IY67 606 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 PLA2G15Q8NCC3 412 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 CCDC112Q8NEF3 446 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RBM41Q96IZ5 413 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 GTPBP2Q9BX10 602 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 HEMGNQ9BXL5 484 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 SLC25A51Q9H1U9 297 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 KCNF1Q9H3M0 494 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 PACSIN2Q9UNF0 486 aaPredicted RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 RPL26L1Q9UNX3 145 aaKnown RBP9.19□□□□□ -0.94
HMGN1-201ENST00000288344 CFAP47Q6ZTR5 3102 aa9.19□□□□□ -0.94
HMGN1-201ENST00000288344 LRP4O75096 1905 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 LY6G6EA0A0G2JKS1 128 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 MACROD2A1Z1Q3 448 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 MIF4GDA9UHW6 222 aaKnown RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 ANKRD66B4E2M5 251 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 TOR1BO14657 336 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 RECQL5O94762 991 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 CER1O95813 267 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 FTCDO95954 541 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 EPOP01588 193 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 CSF2P04141 144 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 ADRB1P08588 477 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 THEGLP0DJG4 465 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 EPHA8P29322 1005 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 PMLP29590 882 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 AKT2P31751 481 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 YPEL5P62699 121 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 DYNLT1P63172 113 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 DPTQ07507 201 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 LAPTM4AQ15012 233 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 SIX1Q15475 284 aaPredicted RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 PPM1JQ5JR12 505 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 HSD11B1LQ7Z5J1 315 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 KIAA1328Q86T90 577 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 TSPAN33Q86UF1 283 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 SLCO6A1Q86UG4 719 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 ZNF567Q8N184 647 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 CCNYQ8ND76 341 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 DEFB124Q8NES8 71 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 SLC35B2Q8TB61 432 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 ACTL9Q8TC94 416 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 QKIQ96PU8 341 aaKnown RBP eCLIP9.18□□□□□ -0.943e-41■■■■■ 75.6
HMGN1-201ENST00000288344 WRAP53Q9BUR4 548 aaKnown RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 TLR10Q9BXR5 811 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 MAK16Q9BXY0 300 aaKnown RBP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 CEP41Q9BYV8 373 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 C10orf88Q9H8K7 445 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 GLOD4Q9HC38 313 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 GDF3Q9NR23 364 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 AASDHPPTQ9NRN7 309 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 AMFRQ9UKV5 643 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 CHKBQ9Y259 395 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 COQ6Q9Y2Z9 468 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.18□□□□□ -0.94
HMGN1-201ENST00000288344 U3KQA8 63 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 PLXNB3Q9ULL4 1909 aa9.18□□□□□ -0.94
HMGN1-201ENST00000288344 ARHGEF17Q96PE2 2063 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 A6NNZ2 444 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 HACD1B0YJ81 288 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 K7ESM1 405 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PSMD11O00231 422 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 PPP1R12AO14974 1030 aaPredicted RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 MAGEC1O60732 1142 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 IPO7O95373 1038 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 CAPNS1P04632 268 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 ALPIP09923 528 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 ATXN1LP0C7T5 689 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 NME1P15531 152 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 DGKAP23743 735 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 TEAD1P28347 426 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 RBL1P28749 1068 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 VIPR1P32241 457 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 ADRA1AP35348 466 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 RABIFP47224 123 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 STC1P52823 247 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SHC2P98077 582 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 OTUD4Q01804 1114 aaKnown RBP9.17□□□□□ -0.94
HMGN1-201ENST00000288344 AP1B1Q10567 949 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 SGCGQ13326 291 aa9.17□□□□□ -0.94
HMGN1-201ENST00000288344 INPP5AQ14642 412 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms