RNA–Protein interactions for RNA: ENST00000279452.10

CD44-204, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-204ENST00000279452 DEFB124Q8NES8 71 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 FAM174AQ8TBP5 190 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 BLOC1S5Q8TDH9 187 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 RHBDD1Q8TEB9 315 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 AP2M1Q96CW1 435 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 TRIM44Q96DX7 344 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 SCRN2Q96FV2 425 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 BMFQ96LC9 184 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 PPP1R2P1Q96PQ5 205 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 LENG8Q96PV6 779 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 FCRL5Q96RD9 977 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 MCCC1Q96RQ3 725 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 FRMD8P1Q9BZ68 369 aaPredicted RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 WDR26Q9H7D7 661 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 ZFYVE1Q9HBF4 777 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 PKD2L2Q9NZM6 624 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 KLQ9UEF7 1012 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 RPL26L1Q9UNX3 145 aaKnown RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 AAR2Q9Y312 384 aaKnown RBP6.54□□□□□ -1.36
CD44-204ENST00000279452 ZNF711Q9Y462 761 aa6.54□□□□□ -1.36
CD44-204ENST00000279452 TNRC6BQ9UPQ9 1833 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 GOLGA6L10A0A0M3HER8 536 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 ANKRD66B4E2M5 251 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PSMD11O00231 422 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PGRMC1O00264 195 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 INPP4BO15327 924 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 YKT6O15498 198 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 FFAR2O15552 330 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 FLRT2O43155 660 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SH3BP5O60239 455 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 DFNA5O60443 496 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 USP12O75317 370 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 AGTP01019 485 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PRLP01236 227 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 CTSEP14091 401 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 TSHRP16473 764 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 HLA-DPA1P20036 260 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 EPHA8P29322 1005 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 BASP1P80723 227 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 OLIG2Q13516 323 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SEPT6Q14141 434 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 IHHQ14623 411 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 ZNF423Q2M1K9 1284 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PPM1JQ5JR12 505 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SIRPB2Q5JXA9 342 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PSAPL1Q6NUJ1 521 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PPP1R21Q6ZMI0 780 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 HEATR4Q86WZ0 1026 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SPATS2Q86XZ4 545 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 DCP2Q8IU60 420 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 HID1Q8IV36 788 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 ATL2Q8NHH9 583 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SLC35B2Q8TB61 432 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 LMX1AQ8TE12 382 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 ASB12Q8WXK4 309 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SCAMP4Q969E2 229 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 CENPTQ96BT3 561 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 DTD2Q96FN9 168 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 OXNAD1Q96HP4 312 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 MS4A14Q96JA4 679 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PBKQ96KB5 322 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 CAPZA3Q96KX2 299 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 MRGPRX2Q96LB1 330 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 COQ10AQ96MF6 247 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 WDR92Q96MX6 357 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 CAMK1GQ96NX5 476 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 TRIB3Q96RU7 358 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 OSBPL9Q96SU4 736 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 NAP1L3Q99457 506 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 KLF6Q99612 283 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 NAPGQ99747 312 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 TBL1YQ9BQ87 522 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 APOOQ9BUR5 198 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 RIOK2Q9BVS4 552 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 AP1M1Q9BXS5 423 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SLC13A1Q9BZW2 595 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 BPIFA1Q9NP55 256 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PHPT1Q9NRX4 125 aaPredicted RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 DNAAF2Q9NVR5 837 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 SMARCAL1Q9NZC9 954 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 APOBEC3BQ9UH17 382 aaKnown RBP6.53□□□□□ -1.36
CD44-204ENST00000279452 DOLKQ9UPQ8 538 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 HS3ST3A1Q9Y663 406 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 PLXNA2O75051 1894 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 CHD5Q8TDI0 1954 aa6.53□□□□□ -1.36
CD44-204ENST00000279452 SPTY2D1-AS1A0A0U1RR47 76 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 A0A1B0GTQ1 180 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 CTAGE9A4FU28 777 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 C5orf60A6NFR6 353 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 K7ESM1 405 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 PDE2AO00408 941 aaPredicted RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 ZNF185O15231 689 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 BUD23O43709 281 aaKnown RBP6.52□□□□□ -1.37
CD44-204ENST00000279452 GCATO75600 419 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 RASGRP1O95267 797 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 METTL18O95568 372 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 ASMTLO95671 621 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 GAS8O95995 478 aa6.52□□□□□ -1.37
CD44-204ENST00000279452 FGF1P05230 155 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms