RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PAGE1O75459 146 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 CRTAMO95727 393 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 C8BP07358 591 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 LTA4HP09960 611 aaKnown RBP12.96□□□□□ -0.34
C9orf3-201ENST00000277198 IGFBP6P24592 240 aaPredicted RBP12.96□□□□□ -0.34
C9orf3-201ENST00000277198 PMLP29590 882 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 ATP4BP51164 291 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 KCNQ1P51787 676 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 SULT2A1Q06520 285 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 TIGD5Q53EQ6 642 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 ARHGAP36Q6ZRI8 547 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM173Q86WV6 379 aaPredicted RBP12.96□□□□□ -0.34
C9orf3-201ENST00000277198 RTL3Q8N8U3 475 aaKnown RBP12.96□□□□□ -0.34
C9orf3-201ENST00000277198 C3orf58Q8NDZ4 430 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 SPPL3Q8TCT6 385 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 DDI1Q8WTU0 396 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 MRGPRX2Q96LB1 330 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 UBXN10Q96LJ8 280 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 PRICKLE1Q96MT3 831 aaPredicted RBP12.96□□□□□ -0.34
C9orf3-201ENST00000277198 PKMYT1Q99640 499 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 SLC25A51Q9H1U9 297 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 TRPC7Q9HCX4 862 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 ATP13A1Q9HD20 1204 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 AP4B1Q9Y6B7 739 aa12.96□□□□□ -0.34
C9orf3-201ENST00000277198 ANKRD33BA6NCL7 494 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 CLPTM1O96005 669 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 JUNP05412 331 aaKnown RBP12.95□□□□□ -0.34
C9orf3-201ENST00000277198 HLA-DQB2P05538 268 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 SMIM18P0DKX4 95 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 HOXB8P17481 243 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-201ENST00000277198 BDNFP23560 247 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 GRIA2P42262 883 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 DPP6P42658 865 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 ACADVLP49748 655 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 PSME3P61289 254 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 MAP7Q14244 749 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 ADGRD2Q7Z7M1 963 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 ABI1Q8IZP0 508 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 TMEM102Q8N9M5 508 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-201ENST00000277198 POF1BQ8WVV4 589 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
C9orf3-201ENST00000277198 PPP1R36Q96LQ0 422 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 SLC25A23Q9BV35 468 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 SIK2Q9H0K1 926 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 THEGQ9P2T0 379 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 IPO11Q9UI26 975 aaKnown RBP12.95□□□□□ -0.34
C9orf3-201ENST00000277198 PCDHGA7Q9Y5G6 932 aa12.95□□□□□ -0.34
C9orf3-201ENST00000277198 M0QZQ0 153 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 UBDO15205 165 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 SLC7A4O43246 635 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF623O75123 536 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 RB1P06400 928 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CD1EP15812 388 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 RENBPP51606 427 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PKNOX1P55347 436 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 RHDQ02161 417 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 TNK2Q07912 1038 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 LRP8Q14114 963 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF460Q14592 562 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 BTBD8Q5XKL5 378 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 LILRA2Q8N149 483 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 LRRC43Q8N309 656 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 BCL7CQ8WUZ0 217 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 MOCOSQ96EN8 888 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF419Q96HQ0 510 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ASB2Q96Q27 587 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 COPS7BQ9H9Q2 264 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 GTSE1Q9NYZ3 720 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 SLC2A6Q9UGQ3 507 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 G3BP2Q9UN86 482 aaKnown RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PLXNA4Q9HCM2 1894 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 A8MT66 165 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 KCNU1A8MYU2 1149 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PSMD12O00232 456 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PMPCBO75439 489 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 FGF18O76093 207 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 EOMESO95936 686 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 FAM58BPP0C7Q3 252 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 NDST2P52849 883 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 WNT3AP56704 352 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CSHL1Q14406 222 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ARTNQ5T4W7 220 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 FAM45BPQ6NSW5 357 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 BORAQ6PGQ7 559 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CNSTQ6PJW8 725 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 KDELC1Q6UW63 502 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CUZD1Q86UP6 607 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 ZNF280BQ86YH2 543 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 THEM5Q8N1Q8 247 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 FAM45AQ8TCE6 357 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PEX13Q92968 403 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 USP13Q92995 863 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 TMA16Q96EY4 203 aaKnown RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 UROC1Q96N76 676 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 PKP2Q99959 881 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 COL25A1Q9BXS0 654 aaPredicted RBP12.94□□□□□ -0.34
C9orf3-201ENST00000277198 SPAG4Q9NPE6 437 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 CACNA2D2Q9NY47 1150 aa12.94□□□□□ -0.34
C9orf3-201ENST00000277198 UBAP1Q9NZ09 502 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms