RNA–Protein interactions for RNA: ENST00000276585.8

MRPS28-201, Transcript of mitochondrial ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPS28, Length 850 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-201ENST00000276585 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.38□□□□□ -0.43
MRPS28-201ENST00000276585 DKK3Q9UBP4 350 aa12.38□□□□□ -0.43
MRPS28-201ENST00000276585 RP1P56715 2156 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 PRAMEF33A0A0G2JMD5 474 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 IGLON5A6NGN9 336 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 ARHGAP42A6NI28 874 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 RIOK3O14730 519 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 PRAMEF10O60809 474 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 SEMA7AO75326 666 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CD48P09326 243 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 TIMP2P16035 220 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 AMPD1P23109 780 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 IL4RP24394 825 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 RPIAP49247 311 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 ZNF135P52742 658 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 RPS21P63220 83 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CCDC15Q0P6D6 951 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 KLRB1Q12918 225 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 BOLA3Q53S33 107 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CAPRIN2Q6IMN6 1127 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 KYAT3Q6YP21 454 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 ZC3H18Q86VM9 953 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 TSEN2Q8NCE0 465 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 ZNF548Q8NEK5 533 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 JPH3Q8WXH2 748 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 HSPH1Q92598 858 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 NAT6Q93015 286 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 NCAPGQ9BPX3 1015 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CCDC3Q9BQI4 270 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 SLC17A9Q9BYT1 436 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CPEB1Q9BZB8 566 aaKnown RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 FOXP3Q9BZS1 431 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 ZWILCHQ9H900 591 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 CUEDC1Q9NWM3 386 aaPredicted RBP12.37□□□□□ -0.43
MRPS28-201ENST00000276585 IP6K2Q9UHH9 426 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.37□□□□□ -0.438e-8■■□□□ 11.5
MRPS28-201ENST00000276585 NF1P21359 2839 aa12.37□□□□□ -0.43
MRPS28-201ENST00000276585 H3BM21 787 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 H3BRJ5 948 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 TMX2-CTNND1H3BSU7 103 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 DFFAO00273 331 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 TSPAN6O43657 245 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 MFAP3LO75121 409 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 PAK4O96013 591 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 AKT2P31751 481 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 IGFALSP35858 605 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 TAS2R40P59535 323 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 IL10RBQ08334 325 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 MMRN1Q13201 1228 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 TBX2Q13207 712 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 TRIM14Q14142 442 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 NFKBIBQ15653 356 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 SLC18A3Q16572 532 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 LACTB2Q53H82 288 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 HEATR4Q86WZ0 1026 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 EFCAB3Q8N7B9 438 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 ASB12Q8WXK4 309 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 GLMNQ92990 594 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 IFT43Q96FT9 208 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 FEM1CQ96JP0 617 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 LENG8Q96PV6 779 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 CHP1Q99653 195 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 IL12RB2Q99665 862 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 ABHD10Q9NUJ1 306 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 DONSONQ9NYP3 566 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 FOXJ2Q9P0K8 574 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 IPO11Q9UI26 975 aaKnown RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 SALL4Q9UJQ4 1053 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 PNMA8BQ9ULN7 279 aaPredicted RBP12.36□□□□□ -0.43
MRPS28-201ENST00000276585 LOXL2Q9Y4K0 774 aa12.36□□□□□ -0.43
MRPS28-201ENST00000276585 SSU72P8A0A1W2PR75 194 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 A6NNZ2 444 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 DAPK3O43293 454 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 DDAH2O95865 285 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 PRKCGP05129 697 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 TPM3P06753 285 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 ITIH1P19827 911 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 CSNK1DP48730 415 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 MAPK10P53779 464 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 PFN3P60673 137 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 SLC10A7Q0GE19 358 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 FZD2Q14332 565 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 ATP13A4Q4VNC1 1196 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 C1QL3Q5VWW1 255 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 Q6ZSR6 202 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 PTAR1Q7Z6K3 402 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-201ENST00000276585 SRLQ86TD4 932 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 CAMK1DQ8IU85 385 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 PGBD5Q8N414 524 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 TP53I13Q8NBR0 393 aaPredicted RBP12.35□□□□□ -0.43
MRPS28-201ENST00000276585 DENND6BQ8NEG7 585 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 OR8K1Q8NGG5 319 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 LMX1AQ8TE12 382 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 ECHDC3Q96DC8 303 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 PSKH2Q96QS6 385 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 GFM1Q96RP9 751 aaKnown RBP12.35□□□□□ -0.43
MRPS28-201ENST00000276585 SUV39H2Q9H5I1 410 aa12.35□□□□□ -0.43
MRPS28-201ENST00000276585 SP110Q9HB58 689 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms