RNA–Protein interactions for RNA: ENST00000275036.11

HMGN3-201, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

TSL 1 (best) BASIC

Gene HMGN3, Length 831 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-201ENST00000275036 LGR4Q9BXB1 951 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SPASTQ9UBP0 616 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 SALL4Q9UJQ4 1053 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 TTLL3Q9Y4R7 772 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 PCDHA13Q9Y5I0 950 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 HEY1Q9Y5J3 304 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 ALG6Q9Y672 507 aa14.45□□□□□ -0.1
HMGN3-201ENST00000275036 RCCD1A6NED2 376 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TMEM202A6NGA9 273 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 YY2O15391 372 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 SPOPO43791 374 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 PRLP01236 227 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 JCHAINP01591 159 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 GP1BAP07359 652 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 MMP2P08253 660 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TGM2P21980 687 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TRIM23P36406 574 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 ETV3P41162 512 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 NOP2P46087 812 aaKnown RBP14.44□□□□□ -0.1
HMGN3-201ENST00000275036 HK3P52790 923 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 E2F1Q01094 437 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TAZQ16635 292 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 C6orf132Q5T0Z8 1188 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 ESRP1Q6NXG1 681 aaKnown RBP14.44□□□□□ -0.1
HMGN3-201ENST00000275036 CRTC1Q6UUV9 634 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 RFLNAQ6ZTI6 216 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 B4GALNT4Q76KP1 1039 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 HID1Q8IV36 788 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 SLC35F3Q8IY50 421 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 CCDC170Q8IYT3 715 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 CNTD1Q8N815 330 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 CCNYQ8ND76 341 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TPCN2Q8NHX9 752 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 OR1E3Q8WZA6 343 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 NUS1Q96E22 293 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 DTD2Q96FN9 168 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 OLFM3Q96PB7 478 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 PANX2Q96RD6 677 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 IL12RB2Q99665 862 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 TDRD1Q9BXT4 1180 aaKnown RBP14.44□□□□□ -0.1
HMGN3-201ENST00000275036 SLC13A1Q9BZW2 595 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 NRSN2Q9GZP1 204 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 FGF22Q9HCT0 170 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 AMACRQ9UHK6 382 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 CHKBQ9Y259 395 aa14.44□□□□□ -0.1
HMGN3-201ENST00000275036 BPTFQ12830 3046 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 A0A0J9YYE9 177 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 A0A1W2PNU3 283 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 CPED1A4D0V7 1026 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 EME2A4GXA9 379 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 LMO7DNF2Z398 122 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 TPP1O14773 563 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 APOL1O14791 398 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 TRBC1P01850 177 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 CYP2A6P11509 494 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 CDKN2BP42772 138 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 MARCKSL1P49006 195 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 KIAA1024LP59773 190 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 SRP54P61011 504 aaKnown RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 DYNLT1P63172 113 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 ADCY2Q08462 1091 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 LLGL1Q15334 1064 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 PNCKQ6P2M8 343 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 Q6ZVL8 140 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 EFL1Q7Z2Z2 1120 aaKnown RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 RD3Q7Z3Z2 195 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 RFX6Q8HWS3 928 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 SFTPA2Q8IWL1 248 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 CEP41Q9BYV8 373 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 USP29Q9HBJ7 922 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 MRPL40Q9NQ50 206 aaKnown RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 DDX56Q9NY93 547 aaKnown RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 SAE1Q9UBE0 346 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 KLQ9UEF7 1012 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 REXO2Q9Y3B8 237 aaKnown RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 EPN1Q9Y6I3 576 aaPredicted RBP14.43□□□□□ -0.1
HMGN3-201ENST00000275036 SCN8AQ9UQD0 1980 aa14.43□□□□□ -0.1
HMGN3-201ENST00000275036 IGSF10Q6WRI0 2623 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 A0A087WV48 116 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 A0A0A6YYK5 440 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 PSTPIP1O43586 416 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 BRINP1O60477 761 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 RASGRP1O95267 797 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 NDUFA10O95299 355 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 HOXC4P09017 264 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 KRT10P13645 584 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 CES1P23141 567 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 HTR1BP28222 390 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 CYLC1P35663 651 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 PDX1P52945 283 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 IFI35P80217 286 aaPredicted RBP14.42□□□□□ -0.1
HMGN3-201ENST00000275036 SKOR1P84550 965 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 PTSQ03393 145 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 AP1B1Q10567 949 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 LRRC66Q68CR7 880 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 RAD9BQ6WBX8 426 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 USP45Q70EL2 814 aa14.42□□□□□ -0.1
HMGN3-201ENST00000275036 TECPR1Q7Z6L1 1165 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms