RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 XYLT1Q86Y38 959 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ULK2Q8IYT8 1036 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 DSELQ8IZU8 1212 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 RP9Q8TA86 221 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 EVLQ9UI08 416 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 ZMYND8Q9ULU4 1186 aaPredicted RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 SCN2BO60939 215 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 STBD1O95210 358 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 SERPINA6P08185 405 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 HTR1BP28222 390 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PURAQ00577 322 aaKnown RBP11.48□□□□□ -0.57
USP53-201ENST00000274030 TTC23Q5W5X9 447 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TATDN1Q6P1N9 297 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 AGMOQ6ZNB7 445 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PAGE2Q7Z2X7 111 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 CUZD1Q86UP6 607 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 FLCNQ8NFG4 579 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 ZFP28Q8NHY6 868 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 PPTC7Q8NI37 304 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 RAD51AP1Q96B01 352 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 MCMBPQ9BTE3 642 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 NMUR1Q9HB89 426 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 EQTNQ9NQ60 294 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 SORCS3Q9UPU3 1222 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 TIMM22Q9Y584 194 aa11.48□□□□□ -0.57
USP53-201ENST00000274030 C9JVG2 144 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 GMFGO60234 142 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 STX11O75558 287 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 MMP3P08254 477 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CD48P09326 243 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 GPR158Q5T848 1215 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 RBFAQ8N0V3 343 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 MREGQ8N565 214 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 FNIP1Q8TF40 1166 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CD101Q93033 1021 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 QKIQ96PU8 341 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP53-201ENST00000274030 CDH19Q9H159 772 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 HIPK3Q9H422 1215 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 EXO5Q9H790 373 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CLN6Q9NWW5 311 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 AKAP7Q9P0M2 348 aaPredicted RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 C3orf18Q9UK00 162 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 PRKAB1Q9Y478 270 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 SNX10Q9Y5X0 201 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 COL3A1P02461 1466 aaPredicted RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 DHRS12A0PJE2 317 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 SCAMP1O15126 338 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 FFAR2O15552 330 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 ADARP55265 1226 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 FUT2Q10981 343 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 FASTKD3Q14CZ7 662 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 POTEHQ6S545 545 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 PYROXD2Q8N2H3 581 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 MYO19Q96H55 970 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 ANKRD27Q96NW4 1050 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 DNAJC5Q9H3Z4 198 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 ABCB10Q9NRK6 738 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CMTM6Q9NX76 183 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 VPS4AQ9UN37 437 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CCL16O15467 120 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 SLC28A2O43868 658 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 UQCRBP14927 111 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 IL12RB1P42701 662 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CXCR3P49682 368 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 FNBP1LQ5T0N5 605 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 RNASEH2BQ5TBB1 312 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 BTN2A1Q7KYR7 527 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CIR1Q86X95 450 aaPredicted RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 LRRC49Q8IUZ0 686 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 C12orf50Q8NA57 414 aaPredicted RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 KCTD15Q96SI1 283 aaPredicted RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.47□□□□□ -0.57
USP53-201ENST00000274030 CERS4Q9HA82 394 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 GTPBP1O00178 669 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 TM4SF1P30408 202 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CORO1AP31146 461 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 PSMD7P51665 324 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 NOMO1Q15155 1222 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 NDUFAF6Q330K2 333 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 DUSP28Q4G0W2 176 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 TEX44Q53QW1 395 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 MTX3Q5HYI7 312 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 OR4A15Q8NGL6 344 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 SPATA22Q8NHS9 363 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 NARS2Q96I59 477 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 APOLD1Q96LR9 279 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 HBEGFQ99075 208 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 FNDC11Q9BVV2 318 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CD84Q9UIB8 345 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 CNOT6Q9ULM6 557 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 CLCNKBP51801 687 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 ATP6V0D1P61421 351 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 PMF1Q6P1K2 205 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 RAVER1Q8IY67 606 aaKnown RBP11.47□□□□□ -0.57
USP53-201ENST00000274030 OMA1Q96E52 524 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 PPM1MQ96MI6 270 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 KIFC1Q9BW19 673 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 TNKS2Q9H2K2 1166 aa11.47□□□□□ -0.57
USP53-201ENST00000274030 DPEP3Q9H4B8 488 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms