RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 STAT4Q14765 748 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 IRF4Q15306 451 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 CSRP2Q16527 193 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 SLC23A3Q6PIS1 610 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 TECPR1Q7Z6L1 1165 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 ALYREFQ86V81 257 aaKnown RBP12.77□□□□□ -0.37
SS18-202ENST00000269138 ZSCAN30Q86W11 494 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 KLHL7Q8IXQ5 586 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 PELI3Q8N2H9 469 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 CEP76Q8TAP6 659 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 MAGEE1Q9HCI5 957 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 RXFP3Q9NSD7 469 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 SLC6A14Q9UN76 642 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
SS18-202ENST00000269138 RIF1Q5UIP0 2472 aaKnown RBP12.76□□□□□ -0.37
SS18-202ENST00000269138 PRR5-ARHGAP8B1AHC4 643 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 LRP3O75074 770 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 AP2A1O95782 977 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 SLC4A1P02730 911 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 FGF1P05230 155 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 HLA-DPA1P20036 260 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 TNNT3P45378 269 aaPredicted RBP12.76□□□□□ -0.37
SS18-202ENST00000269138 FNTAP49354 379 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 TERF1P54274 439 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 LMNB2Q03252 620 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 MSLNQ13421 630 aaPredicted RBP12.76□□□□□ -0.37
SS18-202ENST00000269138 SEMA5AQ13591 1074 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 LRRC14Q15048 493 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 AGERQ15109 404 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 KIF19Q2TAC6 998 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 MFSD2AQ8NA29 543 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 PLA2G15Q8NCC3 412 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 OR13H1Q8NG92 308 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 OR2I1PQ8NGU4 316 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 PPP1R2P1Q96PQ5 205 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 LRRC40Q9H9A6 602 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 PIH1D1Q9NWS0 290 aaKnown RBP12.76□□□□□ -0.37
SS18-202ENST00000269138 RNF14Q9UBS8 474 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 CD84Q9UIB8 345 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 ZNF711Q9Y462 761 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 HS3ST3A1Q9Y663 406 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.76□□□□□ -0.37
SS18-202ENST00000269138 PLXNA2O75051 1894 aa12.76□□□□□ -0.37
SS18-202ENST00000269138 K7ESM1 405 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TLR4O00206 839 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 PSMD11O00231 422 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 FPGTO14772 594 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 VILLO15195 856 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 PSMD3O43242 534 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 URI1O94763 535 aaPredicted RBP12.75□□□□□ -0.37
SS18-202ENST00000269138 PCCBP05166 539 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 ZNF30P17039 623 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TPH1P17752 444 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 GRIA1P42261 906 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 PTGIRP43119 386 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 GRIK2Q13002 908 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 GPS1Q13098 491 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TEAD4Q15561 434 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 PRAMEF14Q5SWL7 426 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TPRG1LQ5T0D9 272 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 PRR23CQ6ZRP0 262 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 Q6ZSR6 202 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TMC3Q7Z5M5 1100 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 RABEPKQ7Z6M1 372 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 ABI3BPQ7Z7G0 1075 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 SPATS2Q86XZ4 545 aaKnown RBP12.75□□□□□ -0.37
SS18-202ENST00000269138 TTC30BQ8N4P2 665 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 DENND6BQ8NEG7 585 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 BLOC1S5Q8TDH9 187 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 SCAMP4Q969E2 229 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 NUS1Q96E22 293 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 DTD2Q96FN9 168 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 C1QTNF7Q9BXJ2 289 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 NUSAP1Q9BXS6 441 aaKnown RBP12.75□□□□□ -0.37
SS18-202ENST00000269138 GPR63Q9BZJ6 419 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 ABCG8Q9H221 673 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 CAAP1Q9H8G2 361 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 ZFYVE1Q9HBF4 777 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 ANKRD6Q9Y2G4 727 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 SNX11Q9Y5W9 270 aa12.75□□□□□ -0.37
SS18-202ENST00000269138 TCRBV7S3A2A0A539 114 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 LNP1A1A4G5 178 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 GOLGA6CA6NDK9 693 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 GOLGA6BA6NDN3 693 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 E7EVH7 732 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 ARHGAP33O14559 1287 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 BUD23O43709 281 aaKnown RBP12.74□□□□□ -0.37
SS18-202ENST00000269138 GDF9O60383 454 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 APRTP07741 180 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 GOLGA6DP0CG33 693 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 THEGLP0DJG4 465 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 ENGP17813 658 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 SPINT3P49223 89 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 LMAN1P49257 510 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 BASP1P80723 227 aaKnown RBP12.74□□□□□ -0.37
SS18-202ENST00000269138 INPP5AQ14642 412 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 PTPRCAPQ14761 206 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 C4orf22Q6V702 233 aa12.74□□□□□ -0.37
SS18-202ENST00000269138 PTAR1Q7Z6K3 402 aaPredicted RBP12.74□□□□□ -0.37
SS18-202ENST00000269138 OR52K1Q8NGK4 314 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms