RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 AKAP14Q86UN6 197 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CLYBLQ8N0X4 340 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ELMOD1Q8N336 334 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 RDH11Q8TC12 318 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 FCRL2Q96LA5 508 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TXLNGYQ9BZA5 131 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TLR8Q9NR97 1041 aaKnown RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 STMN3Q9NZ72 180 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 KLQ9UEF7 1012 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TIMM22Q9Y584 194 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 PIPSLA2A3N6 862 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 RHOAP61586 193 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 SYTL3Q4VX76 610 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 REP15Q6BDI9 236 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 POTEHQ6S545 545 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 PLEKHM3Q6ZWE6 761 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ERI1Q8IV48 349 aaKnown RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 FSTL5Q8N475 847 aaPredicted RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 PROX1Q92786 737 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TRIM63Q969Q1 353 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 HBEGFQ99075 208 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 KRT84Q9NSB2 600 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 MARCH2Q9P0N8 246 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 DERAQ9Y315 318 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 DOT1LQ8TEK3 1739 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 A0A1W2PPW3 197 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 E7ENX8 843 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CCL22O00626 93 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ARIH2O95376 493 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 AP2A1O95782 977 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 T-ENOLP0DO92 83 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 IVDP26440 423 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 HOXD10P28358 340 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 MAPKAPK3Q16644 382 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 FAM171A1Q5VUB5 890 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 RAP1GAP2Q684P5 730 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ADCK2Q7Z695 626 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 LGI2Q8N0V4 545 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CARNMT1Q8N4J0 409 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TOP6BLQ8N6T0 577 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CANT1Q8WVQ1 401 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 HDAC10Q969S8 669 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ADGRE3Q9BY15 652 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 POLR1EQ9GZS1 481 aaKnown RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 SH3BP4Q9P0V3 963 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ADAMTS6Q9UKP5 1117 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 PCDHB7Q9Y5E2 793 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CNTNAP1P78357 1384 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 GNG14A0A1W2PPG7 69 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CENPXA8MT69 81 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 EI24O14681 340 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 CLIC3O95833 236 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 FADS2O95864 444 aaKnown RBP11.57□□□□□ -0.56
VPS33A-201ENST00000267199 GM2AP17900 193 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 ADAM17P78536 824 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 EPS8Q12929 822 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 SDHAF4Q5VUM1 108 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TRIQKQ629K1 86 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 KLHL17Q6TDP4 642 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 DLK2Q6UY11 383 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 SPATA22Q8NHS9 363 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 FBXO27Q8NI29 283 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 KLHL5Q96PQ7 755 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 SEMA3CQ99985 751 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 REEP1Q9H902 201 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 GLOD4Q9HC38 313 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 TEX264Q9Y6I9 313 aa11.57□□□□□ -0.56
VPS33A-201ENST00000267199 MOXD2PA6NHM9 499 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 RECQL5O94762 991 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 C22orf31O95567 290 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ITGALP20701 1170 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 S100A3P33764 101 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 BRCC3P46736 316 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 DUSP28Q4G0W2 176 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 GLT6D1Q7Z4J2 308 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 TBC1D21Q8IYX1 336 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 STAG3L4Q8TBR4 150 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 S100ZQ8WXG8 99 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 CITED4Q96RK1 184 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 WDR12Q9GZL7 423 aaKnown RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 SMPD4Q9NXE4 827 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 H2AFY2Q9P0M6 372 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 TMCC3Q9ULS5 477 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 SPATA2Q9UM82 520 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ST3GAL5Q9UNP4 418 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 SH3BP1Q9Y3L3 701 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 FARP1Q9Y4F1 1045 aaPredicted RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 PTCH2Q9Y6C5 1203 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ANKRD12Q6UB98 2062 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 MYO5AQ9Y4I1 1855 aaKnown RBP11.56□□□□□ -0.56
VPS33A-201ENST00000267199 TMEM233B4DJY2 109 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 CLDN25C9JDP6 229 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 CCNKO75909 580 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 FTH1P02794 183 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 AKR1A1P14550 325 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 AOC1P19801 751 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 L1CAMP32004 1257 aa11.56□□□□□ -0.56
VPS33A-201ENST00000267199 ZNF280AP59817 542 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms