RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 COPS7BQ9H9Q2 264 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 PLAC1Q9HBJ0 212 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 STC2O76061 302 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 CNTN5O94779 1100 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 CAPNS1P04632 268 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 ALOX15P16050 662 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 HARS2P49590 506 aaKnown RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 NUP107P57740 925 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 MRPS22P82650 360 aaKnown RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 SLC10A2Q12908 348 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 EIF4EBP2Q13542 120 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 PDK1Q15118 436 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 CCDC85BQ15834 202 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 MS4A13Q5J8X5 152 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 GRAMD4Q6IC98 578 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 LILRA2Q8N149 483 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 GALNT4Q8N4A0 578 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 VPS50Q96JG6 964 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 RPRD1AQ96P16 312 aaPredicted RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 KLC2Q9H0B6 622 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 PRO3102Q9H379 93 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 PACSIN3Q9UKS6 424 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 PRPF19Q9UMS4 504 aaKnown RBP12.69□□□□□ -0.38
PRPF6-201ENST00000266079 NOTCH4Q99466 2003 aa12.69□□□□□ -0.38
PRPF6-201ENST00000266079 H7C0C1 242 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 ZNF195O14628 629 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 MFSD11O43934 449 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 CEBPBP17676 345 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 PSMC3P17980 439 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 AVPR1AP37288 418 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 ATP5OP48047 213 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 RAB15P59190 212 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 NAA20P61599 178 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 PDAP1Q13442 181 aaKnown RBP12.68□□□□□ -0.38
PRPF6-201ENST00000266079 SPIDRQ14159 915 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 C16orf72Q14CZ0 275 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 BEND5Q7L4P6 421 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 TRPC4APQ8TEL6 797 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 PPP4R1Q8TF05 950 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 NTAN1Q96AB6 310 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 SERPINI1Q99574 410 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 ZNF670Q9BS34 389 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 FRMD8Q9BZ67 464 aaPredicted RBP12.68□□□□□ -0.38
PRPF6-201ENST00000266079 COMMD8Q9NX08 183 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 CLDND1Q9NY35 253 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 CFAP97Q9P2B7 532 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 E9PAM4 449 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 DCXO43602 365 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 SERPINE1P05121 402 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 SERPINB9P50453 376 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 KLF10Q13118 480 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 PPP2R5DQ14738 602 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 CYTH1Q15438 398 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 ALFQ53S48 1182 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 FSCBQ5H9T9 825 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 VWA5B1Q5TIE3 1220 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 NADSYN1Q6IA69 706 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 PDE12Q6L8Q7 609 aaKnown RBP12.68□□□□□ -0.38
PRPF6-201ENST00000266079 FBXL22Q6P050 247 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 C16orf46Q6P387 395 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 GET4Q7L5D6 327 aaPredicted RBP12.68□□□□□ -0.38
PRPF6-201ENST00000266079 ZNF354CQ86Y25 554 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 NPWQ8N729 165 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 CCNYQ8ND76 341 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 IGSF8Q969P0 613 aa12.68□□□□□ -0.38
PRPF6-201ENST00000266079 MOSPD3O75425 235 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 E2F6O75461 281 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 SERPINB7O75635 380 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 PRAMEF12O95522 483 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 SLC6A4P31645 630 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 RGS19P49795 217 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 RPS24P62847 133 aaKnown RBP12.67□□□□□ -0.38
PRPF6-201ENST00000266079 PFKPQ01813 784 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 RELAQ04206 551 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 FLOT2Q14254 428 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 CCDC92Q53HC0 331 aaPredicted RBP12.67□□□□□ -0.38
PRPF6-201ENST00000266079 BRMS1LQ5PSV4 323 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 NCBP2-AS2Q69YL0 99 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 DARS2Q6PI48 645 aaKnown RBP12.67□□□□□ -0.38
PRPF6-201ENST00000266079 TIFABQ6ZNK6 161 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 Q7L0L9 218 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 CHERPQ8IWX8 916 aaKnown RBP12.67□□□□□ -0.38
PRPF6-201ENST00000266079 LGI2Q8N0V4 545 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 LZTR1Q8N653 840 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 ATP6V0D2Q8N8Y2 350 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 SORT1Q99523 831 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 LGMNQ99538 433 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 NSUN3Q9H649 340 aaKnown RBP12.67□□□□□ -0.38
PRPF6-201ENST00000266079 BCAP29Q9UHQ4 241 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 KCNA4P22459 653 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 PSMD7P51665 324 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 SGSHP51688 502 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 ELMSAN1Q6PJG2 1045 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 ATG14Q6ZNE5 492 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 TPGS1Q6ZTW0 290 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 OVCA2Q8WZ82 227 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 BTN2A3PQ96KV6 586 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 PKP2Q99959 881 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 RAB6BQ9NRW1 208 aa12.67□□□□□ -0.38
PRPF6-201ENST00000266079 SEPT10Q9P0V9 454 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms