RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 HNRNPCP07910 306 aaKnown RBP eCLIP16.82■□□□□ 0.28
SQLE-201ENST00000265896 CSRP3P50461 194 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 SQLEQ14534 574 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 SEMA3AQ14563 771 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 OR4D1Q15615 310 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 CYP51A1Q16850 503 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 UNC50Q53HI1 259 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 KLC3Q6P597 504 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 KLHL35Q6PF15 583 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 SGCDQ92629 289 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 ZNF597Q96LX8 424 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 DNAAF2Q9NVR5 837 aaKnown RBP16.82■□□□□ 0.28
SQLE-201ENST00000265896 HS3ST4Q9Y661 456 aa16.82■□□□□ 0.28
SQLE-201ENST00000265896 A0A1W2PQH9 124 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 MATN3O15232 486 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 GGT5P36269 586 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 SLC5A3P53794 718 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 PM20D1Q6GTS8 502 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 RANBP10Q6VN20 620 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 CMTR2Q8IYT2 770 aaKnown RBP16.81■□□□□ 0.28
SQLE-201ENST00000265896 FCRL5Q96RD9 977 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 ABHD16BQ9H3Z7 469 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 SARS2Q9NP81 518 aaKnown RBP16.81■□□□□ 0.28
SQLE-201ENST00000265896 PRRC2BQ5JSZ5 2229 aaKnown RBP16.81■□□□□ 0.28
SQLE-201ENST00000265896 E9PAM4 449 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 H3BNH8 94 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 ANGPT2O15123 496 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 CD247P20963 164 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 GRK4P32298 578 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 PSMD5Q16401 504 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 CARM1Q86X55 608 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 CFAP52Q8N1V2 620 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 PARP8Q8N3A8 854 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 TUBB1Q9H4B7 451 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 FAM105AQ9NUU6 356 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 IKZF3Q9UKT9 509 aa16.81■□□□□ 0.28
SQLE-201ENST00000265896 RRN3P2A6NIE6 340 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 NPHS1O60500 1241 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CRCPO75575 148 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CDK14O94921 469 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 F2P00734 622 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PAMP19021 973 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PSEN2P49810 448 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CDKN1CP49918 316 aaPredicted RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 EMP3P54852 163 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 UGT3A2Q3SY77 523 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 MIPOL1Q8TD10 442 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PBXIP1Q96AQ6 731 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 VPS50Q96JG6 964 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 VAT1Q99536 393 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 UPF3AQ9H1J1 476 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 MEAF6Q9HAF1 191 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CMTM6Q9NX76 183 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 RRN3Q9NYV6 651 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 NDUFA13Q9P0J0 144 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SUCOQ9UBS9 1254 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 SMIM35A0A1B0GVV1 85 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 A0A1W2PPW3 197 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 BOLA2-SMG1P6H3BVE0 249 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 ADRA1AP35348 466 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SERPINH1P50454 418 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 GEMP55040 296 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PFKPQ01813 784 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 POU4F1Q01851 419 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 LPIN1Q14693 890 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PYCR3Q53H96 274 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CXCL17Q6UXB2 119 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SLC15A3Q8IY34 581 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 TTC9BQ8N6N2 239 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 TWIST2Q8WVJ9 160 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 BRI3BPQ8WY22 251 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 RANBP9Q96S59 729 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SLC25A23Q9BV35 468 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 AGO3Q9H9G7 860 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 GALPQ9UBC7 116 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 CD300AQ9UGN4 299 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 DHRS12A0PJE2 317 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 F9P00740 461 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 EEF1B2P24534 225 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 CCNCP24863 283 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SLC7A1P30825 629 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 PIGFQ07326 219 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 EFEMP1Q12805 493 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 NHSL2Q5HYW2 709 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 SAMD4BQ5PRF9 694 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 LDLRAP1Q5SW96 308 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 ZNF678Q5SXM1 525 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 ANKRD34AQ69YU3 496 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 TMEM214Q6NUQ4 689 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 AGMOQ6ZNB7 445 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 TMEM26Q6ZUK4 368 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 LARP4Q71RC2 724 aaKnown RBP eCLIP16.8■□□□□ 0.28
SQLE-201ENST00000265896 CILP2Q8IUL8 1156 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 LRRC43Q8N309 656 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 OR2T34Q8NGX1 318 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 OR2T3Q8NH03 318 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 MYEOVQ96EZ4 313 aa16.8■□□□□ 0.28
SQLE-201ENST00000265896 NOL6Q9H6R4 1146 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 EML4Q9HC35 981 aaKnown RBP16.8■□□□□ 0.28
SQLE-201ENST00000265896 MYLKQ15746 1914 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms