RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 KLHL23Q8NBE8 558 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 HEXDCQ8WVB3 486 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 SPACA7Q96KW9 195 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 SNRNP25Q9BV90 132 aaKnown RBP17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 MRPS7Q9Y2R9 242 aaKnown RBP17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 UGT2B17O75795 530 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 BTN3A2P78410 334 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 SAPCD2Q86UD0 394 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 ZNHIT2Q9UHR6 403 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 APOC1P02654 83 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 GOT1P17174 413 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 CASP5P51878 434 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 ZMYND11Q15326 602 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 OR4L1Q8NH43 312 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 MANSC4A6NHS7 340 aaPredicted RBP17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 ZMPSTE24O75844 475 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 SWI5Q1ZZU3 235 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 WSCD1Q658N2 575 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 SIX5Q8N196 739 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 PEX11AO75192 247 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 DBTP11182 482 aaKnown RBP17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 EPHA3P29320 983 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 CRHR1P34998 444 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 RAET1GQ6H3X3 334 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 DAW1Q8N136 415 aa17.49■□□□□ 0.39
NOTCH3-201ENST00000263388 hCG_1818297A0A087WSY0 165 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TBC1D3BA6NDS4 549 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CSH1P0DML2 217 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CSH2P0DML3 217 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PRKAR2AP13861 404 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TNFAIP8L3Q5GJ75 292 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 DENND5AQ6IQ26 1287 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 GPR180Q86V85 440 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CCDC28BQ9BUN5 200 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 BRD9Q9H8M2 597 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SUCOQ9UBS9 1254 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 LAMA4Q16363 1823 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ASTN1O14525 1302 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 AZIN1O14977 448 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 RGL2O15211 777 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SERPINA1P01009 418 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CELF3Q5SZQ8 465 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 OAFQ86UD1 273 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 BTBD9Q96Q07 612 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 GORASP1Q9BQQ3 440 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CHST10O43529 356 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SCGNO76038 276 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 GJB6O95452 261 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 LINC00032P0C843 101 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ATN1P54259 1190 aaPredicted RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ACVR2BQ13705 512 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC5A9Q2M3M2 681 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 MIIPQ5JXC2 388 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TRPV1Q8NER1 839 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 GAD1Q99259 594 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 LMAN2LQ9H0V9 348 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TNFSF13BQ9Y275 285 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 IQCMA0A1B0GVH7 501 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PERM1Q5SV97 790 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM171BQ6P995 826 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CNSTQ6PJW8 725 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 FRMD6Q96NE9 622 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 CDH19Q9H159 772 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 GTPBP1O00178 669 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 KRT36O76013 467 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SNX4O95219 450 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TPGS1Q6ZTW0 290 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PQLC1Q8N2U9 271 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ELMO3Q96BJ8 720 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 OR10H1Q9Y4A9 318 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 FAM208AQ9UK61 1670 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 MAGEB3O15480 346 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PRODHO43272 600 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ADSLP30566 484 aaPredicted RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 RPL22P35268 128 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 MTHFRP42898 656 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PGBD2Q6P3X8 592 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TCAIMQ8N3R3 496 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 PRELID2Q8N945 189 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 RFT1Q96AA3 541 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ACO2Q99798 780 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ELL3Q9HB65 397 aaPredicted RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 RASSF1Q9NS23 344 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 RAB26Q9ULW5 256 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 OGNP20774 298 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 TAPT1Q6NXT6 567 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 ALYREFQ86V81 257 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 KLHL32Q96NJ5 620 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 MRPL17Q9NRX2 175 aaKnown RBP17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 SLC27A6Q9Y2P4 619 aa17.48■□□□□ 0.39
NOTCH3-201ENST00000263388 LINGO1Q96FE5 620 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 CPA4Q9UI42 421 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 ZNF510Q9Y2H8 683 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 PCDHGB3Q9Y5G1 929 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 AP4B1Q9Y6B7 739 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 LDOC1O95751 146 aaPredicted RBP17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 PFKPQ01813 784 aa17.47■□□□□ 0.39
NOTCH3-201ENST00000263388 GRM3Q14832 879 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms