RNA–Protein interactions for RNA: ENST00000263187.3

MSH4-201, Transcript of mutS homolog 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH4, Length 3,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH4-201ENST00000263187 RBM38Q9H0Z9 239 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 MUC3BQ9H195 1237 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 EML4Q9HC35 981 aaKnown RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 ENTPD7Q9NQZ7 604 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 OLAHQ9NV23 265 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PTTG2Q9NZH5 202 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CDH9Q9ULB4 789 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 CDC14AQ9UNH5 594 aa9.14□□□□□ -0.95
MSH4-201ENST00000263187 PRG3Q9Y2Y8 225 aaPredicted RBP9.14□□□□□ -0.95
MSH4-201ENST00000263187 A0A087X1B8 175 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 IQCA1LA6NCM1 817 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SUPT3HB4E1H0 165 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ANGPT2O15123 496 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 B4GAT1O43505 415 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 STRNO43815 780 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 STAMBPO95630 424 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 PCNAP12004 261 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 PCSK1P29120 753 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 FMO4P31512 558 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ACVRL1P37023 503 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 AGTR2P50052 363 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CSRP3P50461 194 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 NR1H2P55055 460 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 UNC50Q53HI1 259 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 XKR4Q5GH76 650 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SIRPB2Q5JXA9 342 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 PIK3R6Q5UE93 754 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MARC1Q5VT66 337 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 RAP1GAP2Q684P5 730 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 OVOS1Q6IE37 1185 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 POTEHQ6S545 545 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 USP34Q70CQ2 3546 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SCD5Q86SK9 330 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CILP2Q8IUL8 1156 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 RIN3Q8TB24 985 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 DLG3Q92796 817 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MS4A4AQ96JQ5 239 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MAELQ96JY0 434 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 IL12RB2Q99665 862 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 AP5M1Q9H0R1 490 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 NOL6Q9H6R4 1146 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 SMOXQ9NWM0 555 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 OAZ3Q9UMX2 235 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 DMTF1Q9Y222 760 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MYRFQ9Y2G1 1151 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 M0QZ92 97 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 TRIM24O15164 1050 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MGEA5O60502 916 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 H6PDO95479 791 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 AXLP30530 894 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CDKN1CP49918 316 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 PFKPQ01813 784 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 GRB14Q14449 540 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 UPP1Q16831 310 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 TTC33Q6PID6 262 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 RALGPS2Q86X27 583 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 SPATA2LQ8IUW3 424 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 ZC3H15Q8WU90 426 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 PBXIP1Q96AQ6 731 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MYEOVQ96EZ4 313 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ZFRQ96KR1 1074 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 CATSPERBQ9H7T0 1116 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ZNF696Q9H7X3 374 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MEAF6Q9HAF1 191 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 THEGQ9P2T0 379 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 AP1G1O43747 822 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CDK14O94921 469 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 GOT2P00505 430 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 COL6A2P12110 1019 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 THPOP40225 353 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 NEDD8Q15843 81 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CYP51A1Q16850 503 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 TBC1D25Q3MII6 688 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ZNF678Q5SXM1 525 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 ZNF549Q6P9A3 640 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 METTL23Q86XA0 190 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 CNTN4Q8IWV2 1026 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 AFAP1L2Q8N4X5 818 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MAGEE2Q8TD90 523 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 TWIST2Q8WVJ9 160 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SEMA3CQ99985 751 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SLC25A23Q9BV35 468 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 UPF3AQ9H1J1 476 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 LTB4R2Q9NPC1 389 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 GALPQ9UBC7 116 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 RSL24D1Q9UHA3 163 aaKnown RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 IKZF3Q9UKT9 509 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 SLC27A5Q9Y2P5 690 aa9.13□□□□□ -0.95
MSH4-201ENST00000263187 MAGED1Q9Y5V3 778 aaPredicted RBP9.13□□□□□ -0.95
MSH4-201ENST00000263187 LOC285556D6RIA3 1793 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 TMCC1O94876 653 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 S1PR4O95977 384 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 CHRNA1P02708 482 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 NR4A1P22736 598 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 HPCAP84074 193 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 APOFQ13790 326 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 HERC3Q15034 1050 aa9.12□□□□□ -0.95
MSH4-201ENST00000263187 FSCN1Q16658 493 aaKnown RBP9.12□□□□□ -0.95
MSH4-201ENST00000263187 PABPC1LQ4VXU2 614 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms