RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 NAPEPLDQ6IQ20 393 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 C14orf80Q86SX3 495 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 PHF21BQ96EK2 531 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 TEPSINQ96N21 525 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 MUS81Q96NY9 551 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 KIFC1Q9BW19 673 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 CDHR5Q9HBB8 845 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 PARVBQ9HBI1 364 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 ANGPT2O15123 496 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 GPX3P22352 226 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 AXLP30530 894 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 ARHGAP17Q68EM7 881 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 LARP4Q71RC2 724 aaKnown RBP eCLIP15□□□□□ -0.01
XRCC1-201ENST00000262887 FAM35AQ86V20 835 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 PARP8Q8N3A8 854 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 MINDY1Q8N5J2 469 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 CCDC126Q96EE4 140 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 CTRCQ99895 268 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 ING2Q9H160 280 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 CMTM6Q9NX76 183 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 GMIPQ9P107 970 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 WARS2Q9UGM6 360 aaKnown RBP15□□□□□ -0.01
XRCC1-201ENST00000262887 ERVK-11Q9UQG0 969 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 VWA7Q9Y334 891 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 NDUFAF1Q9Y375 327 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 PHIPQ8WWQ0 1821 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 BPTFQ12830 3046 aa15□□□□□ -0.01
XRCC1-201ENST00000262887 M0QYT0 321 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ALDOCP09972 364 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 PTPN2P17706 415 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ACADSBP45954 432 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 POLD2P49005 469 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 VPS26BQ4G0F5 336 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ZNF280DQ6N043 979 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 CRTC3Q6UUV7 619 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ANKRD13BQ86YJ7 626 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ZNF280CQ8ND82 737 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 VTA1Q9NP79 307 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 VPS51Q9UID3 782 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 TRHDEQ9UKU6 1024 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 FAM72CH0Y354 149 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 PPEF2O14830 753 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 BCAS1O75363 584 aaPredicted RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 MTHFD1P11586 935 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 LEPRP48357 1165 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ARCN1P48444 511 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 AQP6Q13520 282 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 POU6F1Q14863 301 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 TECRLQ5HYJ1 363 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 FAM72AQ5TYM5 149 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 OTUD1Q5VV17 481 aaPredicted RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 FAM72DQ6L9T8 149 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 PIWIL3Q7Z3Z3 882 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 FAM72BQ86X60 149 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 IFNLR1Q8IU57 520 aaPredicted RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 MAGEE1Q9HCI5 957 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 AKIP1Q9NQ31 210 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ANKMY1Q9P2S6 941 aa14.99□□□□□ -0.01
XRCC1-201ENST00000262887 ZFC3H1O60293 1989 aaKnown RBP14.99□□□□□ -0.01
XRCC1-201ENST00000262887 MYO1DO94832 1006 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 LDLRP01130 860 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 UGT2B4P06133 528 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 NCAM1P13591 858 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TSPAN8P19075 237 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TGM1P22735 817 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 GSTM2P28161 218 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 SLC1A2P43004 574 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TRIM32Q13049 653 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 IFNEQ86WN2 208 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CNTN4Q8IWV2 1026 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TBC1D21Q8IYX1 336 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 LEMD2Q8NC56 503 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 C19orf60Q96EN9 201 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TRIM8Q9BZR9 551 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ADNPQ9H2P0 1102 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 EHD1Q9H4M9 534 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MRM3Q9HC36 420 aaKnown RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CARD8Q9Y2G2 431 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 LCTP09848 1927 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 AP3B1O00203 1094 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 NCAM2O15394 837 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MTSS1O43312 755 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 MYL3P08590 195 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ARF4P18085 180 aaPredicted RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 RCVRNP35243 200 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 TPI1P60174 286 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PGS1Q32NB8 556 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 ZIK1Q3SY52 487 aaPredicted RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 IQSEC1Q6DN90 963 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PKN3Q6P5Z2 889 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 CYHR1Q6ZMK1 362 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 SNX29P2Q8IUI4 249 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 SPNS2Q8IVW8 549 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 NPWQ8N729 165 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PDZD8Q8NEN9 1154 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 PTCD2Q8WV60 388 aaKnown RBP14.98□□□□□ -0.01
XRCC1-201ENST00000262887 S100ZQ8WXG8 99 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 BHMTQ93088 406 aa14.98□□□□□ -0.01
XRCC1-201ENST00000262887 OTUD5Q96G74 571 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms