RNA–Protein interactions for RNA: ENST00000262631.10

SCN1B-201, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-201ENST00000262631 TMEM52BQ4KMG9 183 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 MICALCLQ6ZW33 695 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 HSD11B1LQ7Z5J1 315 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 TMC3Q7Z5M5 1100 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 TOE1Q96GM8 510 aaKnown RBP24.38■■□□□ 1.49
SCN1B-201ENST00000262631 RANBP9Q96S59 729 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 PLAC1Q9HBJ0 212 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 BPIFA1Q9NP55 256 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 SLC2A6Q9UGQ3 507 aa24.38■■□□□ 1.49
SCN1B-201ENST00000262631 IGHV1OR15-9A0A0B4J2B8 117 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 HEATR9A2RTY3 570 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 TSPAN6O43657 245 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 ZNF217O75362 1048 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 ELFN1P0C7U0 828 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 GM2AP17900 193 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 HMGCLP35914 325 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 ZNF140P52738 457 aaPredicted RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 STC1P52823 247 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 CSTF1Q05048 431 aaKnown RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 SEL1L3Q68CR1 1132 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 CBARPQ8N350 705 aaPredicted RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 FBXO36Q8NEA4 188 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 PPHLN1Q8NEY8 458 aaKnown RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 OR13C4Q8NGS5 318 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 STAMBPL1Q96FJ0 436 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 SRPK1Q96SB4 655 aaKnown RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 EBNA1BP2Q99848 306 aaKnown RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 KIFC1Q9BW19 673 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 PHACTR1Q9C0D0 580 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 SOX13Q9UN79 622 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 ZFR2Q9UPR6 939 aaKnown RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 COQ6Q9Y2Z9 468 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 C2orf81A6NN90 581 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 CCL22O00626 93 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 CRTAMO95727 393 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 C6P13671 934 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 ZNF30P17039 623 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 NMBRP28336 390 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 FNTBP49356 437 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 OR4K2Q8NGD2 314 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 MFSD3Q96ES6 412 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 SGK2Q9HBY8 427 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 WSB2Q9NYS7 404 aaPredicted RBP24.37■■□□□ 1.49
SCN1B-201ENST00000262631 IL17CQ9P0M4 197 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 SAMD15Q9P1V8 674 aa24.37■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3DA0A087WVF3 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3IA0A087WXS9 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3EA0A087X179 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3KA0A087X1G2 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3FA6NER0 549 aaPredicted RBP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3LB9A6J9 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 H0Y858 1186 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 EIF3HO15372 352 aaKnown RBP eCLIP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3HP0C7X1 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 LPOP22079 712 aaPredicted RBP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 CD6P30203 668 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 PPP2CBP62714 309 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 PPP2CAP67775 309 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 UBAP2Q5T6F2 1119 aaKnown RBP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3GQ6DHY5 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3CQ6IPX1 549 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 TBC1D3Q8IZP1 549 aaPredicted RBP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 CXorf40AQ8TE69 158 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 LRRC39Q96DD0 335 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 DNAJC1Q96KC8 554 aaKnown RBP24.36■■□□□ 1.49
SCN1B-201ENST00000262631 C9orf72Q96LT7 481 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 PREBQ9HCU5 417 aa24.36■■□□□ 1.49
SCN1B-201ENST00000262631 IGLON5A6NGN9 336 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 GPR37L1O60883 481 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 SEMA4FO95754 770 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 ETV3P41162 512 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 MAGEA4P43358 317 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 TMPRSS15P98073 1019 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 TSTD2Q5T7W7 516 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 ESRP1Q6NXG1 681 aaKnown RBP24.35■■□□□ 1.49
SCN1B-201ENST00000262631 TMEM135Q86UB9 458 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 OR13J1Q8NGT2 312 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 PTCD2Q8WV60 388 aaKnown RBP24.35■■□□□ 1.49
SCN1B-201ENST00000262631 FCRL3Q96P31 734 aaPredicted RBP24.35■■□□□ 1.49
SCN1B-201ENST00000262631 KDM4CQ9H3R0 1056 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 TREX1Q9NSU2 369 aa24.35■■□□□ 1.49
SCN1B-201ENST00000262631 MBD1Q9UIS9 605 aaPredicted RBP24.35■■□□□ 1.49
SCN1B-201ENST00000262631 A0A1W2PQU0 124 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 RNGTTO60942 597 aaKnown RBP24.34■■□□□ 1.49
SCN1B-201ENST00000262631 MCM3P25205 808 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 OXTRP30559 389 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 ARSDP51689 593 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 TMEM259Q4ZIN3 620 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 Q6ZVL8 140 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 OR2T34Q8NGX1 318 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 PYROXD1Q8WU10 500 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 CFAP36Q96G28 342 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 COQ10AQ96MF6 247 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 MRM3Q9HC36 420 aaKnown RBP24.34■■□□□ 1.49
SCN1B-201ENST00000262631 ZC3H7BQ9UGR2 993 aaKnown RBP24.34■■□□□ 1.49
SCN1B-201ENST00000262631 RPS6KL1Q9Y6S9 549 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 CCDC163A0A0D9SF12 145 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 FAM237BA0A1B0GVD1 139 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 MAGEB16A2A368 324 aa24.34■■□□□ 1.49
SCN1B-201ENST00000262631 C10orf142B7Z368 130 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms