RNA–Protein interactions for RNA: ENST00000262316.10

RHBDF1-201, Transcript of rhomboid 5 homolog 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHBDF1, Length 2,992 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-201ENST00000262316 KLC3Q6P597 504 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 ISCA2Q86U28 154 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 PTGR2Q8N8N7 351 aaPredicted RBP17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 CALML6Q8TD86 181 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 TMEM169Q96HH4 297 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 CATSPERZQ9NTU4 200 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 CLEC4EQ9ULY5 219 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 BTRCQ9Y297 605 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 YIPF1Q9Y548 306 aa17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 COPG1Q9Y678 874 aaKnown RBP17.14■□□□□ 0.33
RHBDF1-201ENST00000262316 H3BNC9 293 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 APOA4P06727 396 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ZDHHC11BP0C7U3 371 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PAX3P23760 479 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 CSRP3P50461 194 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 FOXA1P55317 472 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 FRG1Q14331 258 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PSAPL1Q6NUJ1 521 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 KLHDC8BQ8IXV7 354 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 MAB21L3Q8N8X9 362 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SPATA17Q96L03 361 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 TRIM8Q9BZR9 551 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ELAC1Q9H777 363 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 GMPR2Q9P2T1 348 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 RAI2Q9Y5P3 530 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 NIPSNAP2O75323 286 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 GFAPP14136 432 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 RAP1GDS1P52306 607 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PITRM1Q5JRX3 1037 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 LRRC73Q5JTD7 316 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 RNF111Q6ZNA4 994 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 OTOP2Q7RTS6 562 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.13■□□□□ 0.332e-6■■■■■ 163.7
RHBDF1-201ENST00000262316 TRPC4APQ8TEL6 797 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SLC39A3Q9BRY0 314 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 CWH43Q9H720 699 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PDFQ9HBH1 243 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ZNF334Q9HCZ1 680 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SEMA4BQ9NPR2 832 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ARHGAP26Q9UNA1 814 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 POMPQ9Y244 141 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 TIMM22Q9Y584 194 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 A0A087X1B8 175 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 CDC7O00311 574 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SRP72O76094 671 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PRLP01236 227 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ALOX15P16050 662 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 VHLP40337 213 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 TUFMP49411 452 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 CLCN5P51795 746 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 YBEYP58557 167 aaPredicted RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ACTR3P61158 418 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 TIAL1Q01085 375 aaKnown RBP eCLIP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ELAVL2Q12926 359 aaKnown RBP17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 PTPRNQ16849 979 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 ZNF461Q8TAF7 563 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 C3orf30Q96M34 536 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 HBEGFQ99075 208 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 MFSD1Q9H3U5 465 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 MTRRQ9UBK8 725 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SEPT3Q9UH03 358 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 MID2Q9UJV3 735 aa17.13■□□□□ 0.33
RHBDF1-201ENST00000262316 SDHDO14521 159 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 SLC7A4O43246 635 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 GPC4O75487 556 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 CYLC2Q14093 348 aaPredicted RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 CCNIQ14094 377 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 BTG3Q14201 252 aaPredicted RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 CAMK1DQ8IU85 385 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 DSELQ8IZU8 1212 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 BRSK1Q8TDC3 778 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 PTCD2Q8WV60 388 aaKnown RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 TNKS2Q9H2K2 1166 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 SMAD6O43541 496 aaKnown RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 NDUFS3O75489 264 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 NDST3O95803 873 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 UBTFL6P0CB48 400 aaPredicted RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 ITGB8P26012 769 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 DPP6P42658 865 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 AGTR2P50052 363 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 ARF5P84085 180 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 ART3Q13508 389 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 AGKQ53H12 422 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 HABP4Q5JVS0 413 aaKnown RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 FAM91A1Q658Y4 838 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 NET1Q7Z628 596 aaPredicted RBP17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 HS6ST3Q8IZP7 471 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 HHIPL1Q96JK4 782 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 GPR21Q99679 349 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 ADA2Q9NZK5 511 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 SUFUQ9UMX1 484 aa17.12■□□□□ 0.33
RHBDF1-201ENST00000262316 SUPT3HB4E1H0 165 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 SUPT3HO75486 399 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 RPP40O75818 363 aaKnown RBP17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 TMCC1O94876 653 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 CHRM3P20309 590 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 RING1Q06587 406 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 TRAF2Q12933 501 aa17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 TSNQ15631 228 aaKnown RBP17.11■□□□□ 0.33
RHBDF1-201ENST00000262316 DBN1Q16643 649 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms