RNA–Protein interactions for RNA: ENST00000262188.12

SMARCD3-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD3, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-201ENST00000262188 A0A1W2PP55 124 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 UPK3BL1B0FP48 263 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 UPK3BL2E5RIL1 263 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 NDUFAB1O14561 156 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 SPINT1O43278 529 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 DCXO43602 365 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 RNASEH1O60930 286 aaKnown RBP27.54■■■□□ 2
SMARCD3-201ENST00000262188 ALADP13716 330 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 NMBRP28336 390 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 SSTR1P30872 391 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 UNC5BQ8IZJ1 945 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 MFSD3Q96ES6 412 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 EBNA1BP2Q99848 306 aaKnown RBP27.54■■■□□ 2
SMARCD3-201ENST00000262188 IL22Q9GZX6 179 aa27.54■■■□□ 2
SMARCD3-201ENST00000262188 PIAS1O75925 651 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 ACSL3O95573 720 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 GABRG2P18507 467 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 LHCGRP22888 699 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 P2RY2P41231 377 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 NAA25Q14CX7 972 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 EMBQ6PCB8 327 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 KIAA1324Q6UXG2 1013 aaKnown RBP27.53■■■□□ 2
SMARCD3-201ENST00000262188 SYNPOQ8N3V7 929 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 FCRL3Q96P31 734 aaPredicted RBP27.53■■■□□ 2
SMARCD3-201ENST00000262188 SLC40A1Q9NP59 571 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP27.53■■■□□ 2
SMARCD3-201ENST00000262188 DKK3Q9UBP4 350 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 ZC3H7BQ9UGR2 993 aaKnown RBP27.53■■■□□ 2
SMARCD3-201ENST00000262188 CAPN8A6NHC0 703 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 LDB2O43679 373 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 CLDN7O95471 211 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 PMS2P54278 862 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 GPX6P59796 221 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 TMPRSS15P98073 1019 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 HSF5Q4G112 596 aaPredicted RBP27.53■■■□□ 2
SMARCD3-201ENST00000262188 FBXL19Q6PCT2 694 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP27.53■■■□□ 2
SMARCD3-201ENST00000262188 GLT6D1Q7Z4J2 308 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 HDDC3Q8N4P3 179 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 SCRN2Q96FV2 425 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 BPIFA1Q9NP55 256 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 DYRK4Q9NR20 520 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 SAMD15Q9P1V8 674 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 ZNF711Q9Y462 761 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 TCAF1Q9Y4C2 921 aa27.53■■■□□ 2
SMARCD3-201ENST00000262188 CHURC1-FNTBB4DL54 471 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 AHCYL1O43865 530 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 ADRB3P13945 408 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 XPAP23025 273 aaPredicted RBP27.52■■■□□ 2
SMARCD3-201ENST00000262188 RPL26P61254 145 aaKnown RBP27.52■■■□□ 2
SMARCD3-201ENST00000262188 MTAPQ13126 283 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 UAP1Q16222 522 aaPredicted RBP27.52■■■□□ 2
SMARCD3-201ENST00000262188 PCID2Q5JVF3 399 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 CRTC1Q6UUV9 634 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 SYT13Q7L8C5 426 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 OR13C4Q8NGS5 318 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 CAVIN3Q969G5 261 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 CLDN23Q96B33 292 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 EPB41L4BQ9H329 900 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 LRRC4CQ9HCJ2 640 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 RPL26L1Q9UNX3 145 aaKnown RBP27.52■■■□□ 2
SMARCD3-201ENST00000262188 TTC28Q96AY4 2481 aa27.52■■■□□ 2
SMARCD3-201ENST00000262188 C1orf232A0A0U1RR37 186 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 RNASEH2AO75792 299 aaKnown RBP27.51■■■□□ 2
SMARCD3-201ENST00000262188 CDKN3Q16667 212 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 PIP5KL1Q5T9C9 394 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 FAM46CQ5VWP2 391 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 ANO7Q6IWH7 933 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 ESRP1Q6NXG1 681 aaKnown RBP27.51■■■□□ 2
SMARCD3-201ENST00000262188 UNC5AQ6ZN44 842 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 ERN2Q76MJ5 926 aaKnown RBP27.51■■■□□ 2
SMARCD3-201ENST00000262188 PPHLN1Q8NEY8 458 aaKnown RBP27.51■■■□□ 2
SMARCD3-201ENST00000262188 GANCQ8TET4 914 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP27.51■■■□□ 2
SMARCD3-201ENST00000262188 SIPA1Q96FS4 1042 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 PPP1R16AQ96I34 528 aa27.51■■■□□ 2
SMARCD3-201ENST00000262188 MCCC1Q96RQ3 725 aaPredicted RBP27.51■■■□□ 2
SMARCD3-201ENST00000262188 PXNP49023 591 aaPredicted RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 POLR2LP62875 67 aaKnown RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 LRRC66Q68CR7 880 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 RFLNAQ6ZTI6 216 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 USP45Q70EL2 814 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 FAM124AQ86V42 546 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 TTC30BQ8N4P2 665 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 BRSK1Q8TDC3 778 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 UBLCP1Q8WVY7 318 aaPredicted RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 ZNF669Q96BR6 464 aaPredicted RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 WRAP53Q9BUR4 548 aaKnown RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 CHRDQ9H2X0 955 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 SOX13Q9UN79 622 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 FNDC3AQ9Y2H6 1198 aaKnown RBP27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 PPIL1Q9Y3C6 166 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 NUMA1Q14980 2115 aa27.51■■□□□ 1.99
SMARCD3-201ENST00000262188 ADH1BP00325 375 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 MAGEA8P43361 318 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 NEK3P51956 506 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 AGBL4Q5VU57 503 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 PALM2Q8IXS6 379 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 SPOCK2Q92563 424 aa27.5■■□□□ 1.99
SMARCD3-201ENST00000262188 DNAJC1Q96KC8 554 aaKnown RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms