RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 FCRL2Q96LA5 508 aaPredicted RBP13.43□□□□□ -0.26
SGCA-201ENST00000262018 OLFM3Q96PB7 478 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 QKIQ96PU8 341 aaKnown RBP eCLIP13.43□□□□□ -0.26
SGCA-201ENST00000262018 PSD3Q9NYI0 1048 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 DTLQ9NZJ0 730 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 GGA2Q9UJY4 613 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MAN2B2Q9Y2E5 1009 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 ATP8A1Q9Y2Q0 1164 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 MFHAS1Q9Y4C4 1052 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 BOD1L1Q8NFC6 3051 aa13.43□□□□□ -0.26
SGCA-201ENST00000262018 KCNU1A8MYU2 1149 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 MFSD11O43934 449 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 MAGEC1O60732 1142 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 SIN3BO75182 1162 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 SFTPCP11686 197 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 ERCC2P18074 760 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 POLR2EP19388 210 aaKnown RBP13.42□□□□□ -0.26
SGCA-201ENST00000262018 RBL1P28749 1068 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 OAS2P29728 719 aaKnown RBP13.42□□□□□ -0.26
SGCA-201ENST00000262018 HTR7P34969 479 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 SLC11A2P49281 568 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 TPI1P60174 286 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 CEP128Q6ZU80 1094 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 RELL1Q8IUW5 271 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 MMAAQ8IVH4 418 aaKnown RBP13.42□□□□□ -0.26
SGCA-201ENST00000262018 AHI1Q8N157 1196 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 MAPK15Q8TD08 544 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 UBLCP1Q8WVY7 318 aaPredicted RBP13.42□□□□□ -0.26
SGCA-201ENST00000262018 AZIN2Q96A70 460 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 RUFY1Q96T51 708 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 EPAS1Q99814 870 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 EPB41L4BQ9H329 900 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 UCKL1Q9NWZ5 548 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 SLC12A6Q9UHW9 1150 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 FZD4Q9ULV1 537 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 SHOC2Q9UQ13 582 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 PLAAQ9Y263 795 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 FARP1Q9Y4F1 1045 aaPredicted RBP13.42□□□□□ -0.26
SGCA-201ENST00000262018 NFS1Q9Y697 457 aa13.42□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3DA0A087WVF3 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3IA0A087WXS9 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3EA0A087X179 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3KA0A087X1G2 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PMS2P1A4D2B8 440 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3FA6NER0 549 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 CDRT15L2A8MXV6 281 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 C10orf142B7Z368 130 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3LB9A6J9 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 SMAPO00193 183 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 KCNN4O15554 427 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 ZNF189O75820 626 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3HP0C7X1 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 DGKAP23743 735 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 SLC8A1P32418 973 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 INHBCP55103 352 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PPP2CBP62714 309 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PPP2CAP67775 309 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 NRG1Q02297 640 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3GQ6DHY5 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3CQ6IPX1 549 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 C4orf22Q6V702 233 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TRMT10CQ7L0Y3 403 aaKnown RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 PRPF39Q86UA1 669 aaKnown RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 HOOK3Q86VS8 718 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PPIL6Q8IXY8 311 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 TBC1D3Q8IZP1 549 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.41□□□□□ -0.26
SGCA-201ENST00000262018 SGF29Q96ES7 293 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PRR11Q96HE9 360 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 BTN2A3PQ96KV6 586 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 PAK5Q9P286 719 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 OR12D3Q9UGF7 316 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 STOML2Q9UJZ1 356 aa13.41□□□□□ -0.26
SGCA-201ENST00000262018 ATXN7L1Q9ULK2 861 aaPredicted RBP13.41□□□□□ -0.26
SGCA-201ENST00000262018 PAGE1O75459 146 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 LRIG2O94898 1065 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 TNFSF15O95150 251 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 MAP3K6O95382 1288 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 ITGB2P05107 769 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 GP1BAP07359 652 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 NUDT17P0C025 328 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 MAT2AP31153 395 aaKnown RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 PSMD8P48556 350 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 DUSP3P51452 185 aaPredicted RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 ADPRHP54922 357 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 ST8SIA6P61647 398 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 STAT4Q14765 748 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 PDK1Q15118 436 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 PRKD1Q15139 912 aaPredicted RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 ADGRF1Q5T601 910 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 MANEALQ5VSG8 457 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 HIST2H2BCQ6DN03 193 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 B4GALNT4Q76KP1 1039 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 KIAA0907Q7Z7F0 614 aaPredicted RBP13.4□□□□□ -0.26
SGCA-201ENST00000262018 CROCCP2Q86T23 111 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 FAM217AQ8IXS0 508 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 ARL14Q8N4G2 192 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 ATP6V0D2Q8N8Y2 350 aa13.4□□□□□ -0.26
SGCA-201ENST00000262018 NAT8LQ8N9F0 302 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms