RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 PSMD9O00233 223 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 GNRH1P01148 92 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 TAPT1Q6NXT6 567 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CLIC5Q9NZA1 410 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 LOC110117498-PIK3R3F6TDL0 507 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 KRT36O76013 467 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 LGALS2P05162 132 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 AQP1P29972 269 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 EIF2S3P41091 472 aaKnown RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 RFX5P48382 616 aaPredicted RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 MC1RQ01726 317 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CBX2Q14781 532 aaPredicted RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.3□□□□□ -0.12
CUX2-201ENST00000261726 RCN3Q96D15 328 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CDCA5Q96FF9 252 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CCDC115Q96NT0 180 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 ATG10Q9H0Y0 220 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CKLFQ9UBR5 152 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 PRKAR2AP13861 404 aaKnown RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 EPHA3P29320 983 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 MC4RP32245 332 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CBX3Q13185 183 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 ALYREFQ86V81 257 aaKnown RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 BAP1Q92560 729 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 GAL3ST3Q96A11 431 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 KLHL32Q96NJ5 620 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 PLGRKTQ9HBL7 147 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 OSER1Q9NX31 292 aa14.3□□□□□ -0.12
CUX2-201ENST00000261726 CNOT6Q9ULM6 557 aaKnown RBP14.3□□□□□ -0.12
CUX2-201ENST00000261726 MANSC4A6NHS7 340 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 SNAP91O60641 907 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TSPAN9O75954 239 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ANPEPP15144 967 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ALDH3A2P51648 485 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ADGRA1Q86SQ6 560 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 JSRP1Q96MG2 331 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 SNRNP25Q9BV90 132 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 GLIS2Q9BZE0 524 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3DA0A087WVF3 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3IA0A087WXS9 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3EA0A087X179 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3KA0A087X1G2 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 NPEPPSL1A6NEC2 478 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3FA6NER0 549 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3LB9A6J9 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 MATN4O95460 622 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3HP0C7X1 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 SPATA31D3P0C874 917 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ARF3P61204 181 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 ARF1P84077 181 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3GQ6DHY5 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3CQ6IPX1 549 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ZPBP2Q6X784 338 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 SPATA31D4Q6ZUB0 917 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TBC1D3Q8IZP1 549 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 RELTQ969Z4 430 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 SGK2Q9HBY8 427 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 CNTNAP4Q9C0A0 1308 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 KDM4FA0A1W2PPD8 638 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 CHP2O43745 196 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 MYBL2P10244 700 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 CASP9P55211 416 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 MAMLD1Q13495 774 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TSEN2Q8NCE0 465 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 OR5T3Q8NGG3 340 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 MRPL57Q9BQC6 102 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 CHMP1AQ9HD42 196 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 WRBO00258 174 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 FFAR2O15552 330 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ELFN1P0C7U0 828 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 GOT1P17174 413 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ANXA8L1Q5VT79 327 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 GALNT18Q6P9A2 607 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 C10orf107Q8IVU9 208 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 SLC9A6Q92581 669 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 C1GALT1C1Q96EU7 318 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ACP6Q9NPH0 428 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 FAUP35544 74 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 PTDSS1P48651 473 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 SLC12A3P55017 1021 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ZNF730Q6ZMV8 503 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 SLC4A11Q8NBS3 891 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 COPS4Q9BT78 406 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 TRBV23OR9-2A0A075B6M9 112 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 CLDN5O00501 218 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 RSL1D1O76021 490 aaKnown RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 SAGP10523 405 aaPredicted RBP14.29□□□□□ -0.12
CUX2-201ENST00000261726 KCNA5P22460 613 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ALAS2P22557 587 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 ITPKAP23677 461 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 GMFBP60983 142 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 C9orf64Q5T6V5 341 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 OLFML1Q6UWY5 402 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 NANOGNBQ7Z5D8 188 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 CHST4Q8NCG5 386 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 NPAS2Q99743 824 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 RIOX1Q9H6W3 641 aa14.29□□□□□ -0.12
CUX2-201ENST00000261726 DHRS12A0PJE2 317 aa14.28□□□□□ -0.12
CUX2-201ENST00000261726 SIGLEC16A6NMB1 481 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms