RNA–Protein interactions for RNA: ENST00000260595.9

CGREF1-201, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CGREF1, Length 1,177 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-201ENST00000260595 NPIPB15A6NHN6 443 aaPredicted RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 TK2O00142 265 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 MYO1FO00160 1098 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 FZD6O60353 706 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 RPLP0P05388 317 aaKnown RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 MYCLP1P12525 358 aaPredicted RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 TPM4P67936 248 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 IHHQ14623 411 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 NFKBIBQ15653 356 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 ATP13A4Q4VNC1 1196 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 CCDC122Q5T0U0 273 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 PCSK4Q6UW60 755 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 CLEC14AQ86T13 490 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 LRRC49Q8IUZ0 686 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 BBS5Q8N3I7 341 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 LSM14AQ8ND56 463 aaKnown RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 FAM46DQ8NEK8 389 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 PIH1D2Q8WWB5 315 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 SLC39A7Q92504 469 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 DTD2Q96FN9 168 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 LIN37Q96GY3 246 aaPredicted RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 GFM1Q96RP9 751 aaKnown RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 LRRN3Q9H3W5 708 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 SYNDIG1Q9H7V2 258 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 KCTD5Q9NXV2 234 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 APPL1Q9UKG1 709 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 LUC7L2Q9Y383 392 aaKnown RBP16.89■□□□□ 0.29
CGREF1-201ENST00000260595 ANKRD36A6QL64 1941 aa16.89■□□□□ 0.29
CGREF1-201ENST00000260595 BAHCC1Q9P281 2608 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 EIF4E1BA6NMX2 242 aaKnown RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 D6RAR5 112 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PSMD11O00231 422 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PDE2AO00408 941 aaPredicted RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 KLK10O43240 276 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 MFSD11O43934 449 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 C1QL1O75973 258 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 TNFSF15O95150 251 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PRB1P04280 392 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 CEACAM5P06731 702 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PDHA1P08559 390 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 CYP2A6P11509 494 aaPredicted RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PNLIPP16233 465 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 GLB1P16278 677 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 ETV3P41162 512 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 MLLT3P42568 568 aaPredicted RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 GALNT2Q10471 571 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 DPYSL3Q14195 570 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 HLTFQ14527 1009 aaKnown RBP eCLIP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 KRT81Q14533 505 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PAFAH1B3Q15102 231 aaKnown RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 CERCAMQ5T4B2 595 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 NCBP2-AS2Q69YL0 99 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 FOXR1Q6PIV2 292 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 Q6ZVL8 140 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 TECPR1Q7Z6L1 1165 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 TSPAN33Q86UF1 283 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 HEATR4Q86WZ0 1026 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 NRROSQ86YC3 692 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 GPBAR1Q8TDU6 330 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 NSMCE1Q8WV22 266 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 PTCD2Q8WV60 388 aaKnown RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 MAML1Q92585 1016 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 FRMD8Q9BZ67 464 aaPredicted RBP16.88■□□□□ 0.29
CGREF1-201ENST00000260595 CPNE5Q9HCH3 593 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 NT5MQ9NPB1 228 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 IFNKQ9P0W0 207 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 RNF215Q9Y6U7 377 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 BPTFQ12830 3046 aa16.88■□□□□ 0.29
CGREF1-201ENST00000260595 A0A0U1RQS6 177 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 ITGA2BP08514 1039 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 TEAD1P28347 426 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 HNRNPH3P31942 346 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 CASP14P31944 242 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 CCKBRP32239 447 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 GARSP41250 739 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 UCNP55089 124 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 TMPRSS3P57727 454 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 CDK3Q00526 305 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 HADHQ16836 314 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 C14orf28Q4W4Y0 310 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 ARMC12Q5T9G4 340 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 BROXQ5VW32 411 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 DENND2CQ68D51 928 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 SPECC1LQ69YQ0 1117 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 ALG1LQ6GMV1 187 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 RFLNAQ6ZTI6 216 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 C17orf82Q86X59 251 aaPredicted RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 CCNJLQ8IV13 435 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 ARL14Q8N4G2 192 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 ZNF564Q8TBZ8 553 aaPredicted RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 SNRNP27Q8WVK2 155 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 SMIM14Q96QK8 99 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 SEMA3CQ99985 751 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 FOXP3Q9BZS1 431 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 PHPT1Q9NRX4 125 aaPredicted RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 SPATS2LQ9NUQ6 558 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 MOSPD1Q9UJG1 213 aa16.87■□□□□ 0.29
CGREF1-201ENST00000260595 FASNP49327 2511 aaKnown RBP16.87■□□□□ 0.29
CGREF1-201ENST00000260595 B4DGG1 531 aa16.86■□□□□ 0.29
CGREF1-201ENST00000260595 TMX2-CTNND1H3BSU7 103 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms