RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 Q6ZVU0 165 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 YTHDF3Q7Z739 585 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 VPS33AQ96AX1 596 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 RTP4Q96DX8 246 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 SORT1Q99523 831 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 MRPL17Q9NRX2 175 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PPM1HQ9ULR3 514 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 SCML2Q9UQR0 700 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 SLC30A1Q9Y6M5 507 aa9.11□□□□□ -0.95
CKAP2-201ENST00000258607 PRRC2CQ9Y520 2896 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 TDRD15B5MCY1 1934 aaKnown RBP9.11□□□□□ -0.95
CKAP2-201ENST00000258607 HEATR9A2RTY3 570 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 RFXAPO00287 272 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 HLA-EP13747 358 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 RHOQP17081 205 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 NRF1Q16656 503 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 LRRC26Q2I0M4 334 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 C6orf10Q5SRN2 563 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TSTD2Q5T7W7 516 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ULK2Q8IYT8 1036 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SPPL2BQ8TCT7 592 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 UCMAQ8WVF2 138 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 MRPS31Q92665 395 aaKnown RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SCAMP4Q969E2 229 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SLC9A7Q96T83 725 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 YIPF3Q9GZM5 350 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CCDC134Q9H6E4 229 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SAR1AQ9NR31 198 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SLC7A8Q9UHI5 535 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ARHGEF37A1IGU5 675 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 MTSS1O43312 755 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CD70P32970 193 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 NPY2RP49146 381 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CDK7P50613 346 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 EPHB3P54753 998 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ARHGEF7Q14155 803 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TRIP4Q15650 581 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TIGD7Q6NT04 549 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 FAM180BQ6P0A1 224 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TRAF7Q6Q0C0 670 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 PAOXQ6QHF9 649 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SH2D5Q6ZV89 423 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 OR13J1Q8NGT2 312 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 DNAJB14Q8TBM8 379 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 RSRC1Q96IZ7 334 aaKnown RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TMEM106CQ9BVX2 250 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ASB8Q9H765 288 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ARHGEF3Q9NR81 526 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CATSPERZQ9NTU4 200 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 FAM149AA5PLN7 773 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 FGF10O15520 208 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CABYRO75952 493 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 PARNO95453 639 aaKnown RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 IRS1P35568 1242 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 MAGEA3P43357 314 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 IL1RL1Q01638 556 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 FAM109BQ6ICB4 259 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 TMEM207Q6UWW9 146 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ACAD11Q709F0 780 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 C7orf61Q8IZ16 206 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 RNF175Q8N4F7 328 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SLAIN1Q8ND83 568 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 OR4L1Q8NH43 312 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 KLK6Q92876 244 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 PTERQ96BW5 349 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 HAPLN3Q96S86 360 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 C17orf80Q9BSJ5 609 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 WRAP53Q9BUR4 548 aaKnown RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 BBS2Q9BXC9 721 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 MAF1Q9H063 256 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 SLC25A51Q9H1U9 297 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 RCOR3Q9P2K3 495 aaPredicted RBP9.1□□□□□ -0.95
CKAP2-201ENST00000258607 CRLS1Q9UJA2 301 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 ANGPTL3Q9Y5C1 460 aa9.1□□□□□ -0.95
CKAP2-201ENST00000258607 G3V2L1 256 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 CCNT2O60583 730 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SNX2O60749 519 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 STATHP02808 62 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TYMPP19971 482 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 VIPR2P41587 438 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 LBX1P52954 281 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 C1QTNF8P60827 252 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TRAF2Q12933 501 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SERINC3Q13530 473 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SF1Q15637 639 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ZRSR2Q15696 482 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 GRASPQ7Z6J2 395 aaPredicted RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TRIM42Q8IWZ5 723 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 MDGA1Q8NFP4 955 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 ZNF461Q8TAF7 563 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 EEF1AKMT1Q8WVE0 214 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SPATA17Q96L03 361 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 FCRL5Q96RD9 977 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 NAT9Q9BTE0 207 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 SIRPGQ9P1W8 387 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 EIF2B4Q9UI10 523 aaKnown RBP9.09□□□□□ -0.95
CKAP2-201ENST00000258607 TAGLN3Q9UI15 199 aa9.09□□□□□ -0.95
CKAP2-201ENST00000258607 VPS4AQ9UN37 437 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms